Pseudomonas cremoricolorata: LK03_06425
Help
Entry
LK03_06425 CDS
T03354
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psw03000
]
LK03_06425
Transcription factors [BR:
psw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LK03_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
HTH_20
HTH_11
HTH_23
HTH_30
HTH_5
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIR88925
UniProt:
A0A089WHY3
LinkDB
All DBs
Position
1495436..1496332
Genome browser
AA seq
298 aa
AA seq
DB search
MRDDLPPLNALRAFEAAARLNSVSQAAEALHVTHGAVSRQIKVLEQHLGVTLFSKEGRGI
KLTDAGIRLRDASGEAFDRLRSICGQLGRDGRQAAFVLGCSGSLLARWFIPRLGRLEAEL
PELRLHLSAGEGDLDPRRPGLDALLVYAEPPWPADMHVHVLAQERIGPVLSPHLPAFAAL
QRAPAEALLGQPLLHTTSRPQAWPNWAKERGLPSDELQMGQAFEHLYYLLEAAVAGLGVA
IAPEPLVADDLRAGRLAAPWGFSPTHAALALWVPRRVANGRAEQLAQWLRRELQRQID
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgaccttcccccgctcaatgccctgcgtgccttcgaggctgcggccaggctc
aatagcgtcagccaggctgccgaggcgctgcacgtaacccatggcgcggtcagccggcag
atcaaggtgctcgagcagcacctgggtgtgaccctgttcagcaaggagggacgcggcatc
aaactcacagatgccgggattcgtctgcgcgatgccagcggcgaggcattcgatcgcctg
cgcagtatttgcgggcaactgggccgcgacgggcgtcaggcagcgttcgtgctgggttgc
tcagggagcttgctggcgcgctggttcattccccggctggggcgtctggaggcagagcta
ccggagctgcgcctgcacctttcggccggtgaaggcgacctcgatccacgtcggcccggt
ctcgatgccctgctggtgtacgcagaaccgccctggccggcggacatgcacgttcatgta
ttggcccaggagcggatcgggccggtgctcagcccgcatctaccggcctttgccgccttg
cagcgggcaccggccgaagcgctgctgggtcagccgctgctgcacaccacatcgcggccg
caggcctggccgaactgggccaaggagcgaggtttgccgagcgatgagttacagatgggg
caggcgttcgagcatttgtactatttgctcgaggcggcagtagccggtttgggggtagcg
attgcacccgagccgctggtggcggatgacctcagggccggcaggttggccgcaccctgg
gggttctctcccacccatgcggccttggcgctgtgggtgcccaggcgcgtcgcaaatgga
cgcgccgagcaactggcgcagtggctgcgccgagagctgcagcgccagatcgattaa
DBGET
integrated database retrieval system
