Pseudomonas cremoricolorata: LK03_06585
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Entry
LK03_06585 CDS
T03354
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw03030
DNA replication
psw03410
Base excision repair
psw03420
Nucleotide excision repair
psw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK03_06585
03410 Base excision repair
LK03_06585
03420 Nucleotide excision repair
LK03_06585
03440 Homologous recombination
LK03_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psw03032
]
LK03_06585
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_06585
Enzymes [BR:
psw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK03_06585
DNA replication proteins [BR:
psw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LK03_06585
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LK03_06585
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK03_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AIR88957
UniProt:
A0A089WR32
LinkDB
All DBs
Position
1525606..1528371
Genome browser
AA seq
921 aa
AA seq
DB search
MSLAPLVLVDGSSYLYRAFHALPPLTTSKGKPTGAVKGVLSMLKGLRRQYPDSLFAVVFD
AKGGTFRDALFAEYKANRPSMPDDLRMQVEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAQGRPVVISTGDKDMAQLVDEHITLVNTMTGSVMDIAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLAEVYANLDQVAGLSIRGAKTLAAKLEEHRDA
AFLSYELATIKIDVPLDIEVEALVCAEPDRDTLLELYNDLEFKSWVAEVQREAVKVGDVV
APAKAPAEKVEAKYETILDEARFEHWLERLNNASLFAFDTETTSLDAQQAQLVGLSFAIE
PHEAAYVPLMHDYEGAPAQLDRDRVLLALKPLLENPAKGKIGQNAKYDINILANCAIGGD
PAQGIEMRGVAYDTLLESYVLNSTATRHDMDSLALRYLEHTTITFEDIAGRGAKKLTFNQ
IPLETAGPYAAEDADITLRLHHALQALLAKTPSVQPVLMDIEMPLVPVLAKIERQGALVD
AELLRVQSSELGQKMAALEKEAFELAGEAFNLGSPKQLGVILYDKLGMPILNKTSKGQAS
TAEAVLAELAEMQYPLPKVLMQYRTLSKLKSTYTDKLPEQINPRTGRVHTSYQQAVAATG
RLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAF
QNDLDVHRATAAEVFGVPLESVSNDQRRSAKAINFGLIYGMSSFGLARQIGVDRKQSQAY
IDRYFTQYPGVLAYMERTRTQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAP
MQGTAADIIKRAMVTVDAWLSESGLDARVILQVHDELVLEVREDQVEQVAQQIRLHMSGA
AQLDVPLLVEVGIGSNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagcctagcgcccctcgtcctggtggacggatcctcctatctgtaccgcgcgtttcat
gcgctaccgccgctgaccacttcgaagggcaagcccaccggcgcggtgaaaggcgtgctg
agcatgctcaagggcttgcgccggcagtaccccgatagcctgttcgccgtggtcttcgac
gccaagggcgggaccttccgcgatgcgctgttcgccgaatacaaggccaaccggccgagc
atgcccgatgatctgcgcatgcaggtcgaaccgctgcatgccagcgtgcgcgcgctgggc
tatccgctgctgtgcgtcgaaggcgtcgaggccgatgacgtcatcggcaccctcgcccgc
agcagcgccgcgcaaggccgaccggtggtcatctccaccggtgacaaggacatggcgcag
ctggtggacgagcacattaccctggtcaacaccatgactggcagcgtgatggacatcgcc
ggcgtgcacgagaagttcggcgtcggccctgagcacatcatcgatttcctcgcgctgatg
ggcgacaaggtggacaacatcccaggggtacccggcgtcggcgagaagaccgccgtcggc
ctgctgaccggcatcggcgggggtctggccgaggtgtatgccaacctcgaccaggtcgcg
ggcctgagcattcgcggcgccaagacccttgccgccaagctcgaagagcaccgcgacgcc
gcgttcctctcctacgagctggcgaccatcaagatcgacgtgccgctggacatcgaagtc
gaagcgctggtgtgcgccgagcctgatcgcgacaccttgctcgagctctacaacgacctg
gagttcaagagctgggtcgccgaggtacagcgtgaggcggtcaaggtcggtgacgtcgtc
gccccggccaaggcgccggcggaaaaggtcgaagcgaagtacgaaaccatcctcgacgaa
gcgcgcttcgagcattggctcgagcgcctgaacaacgcctcgctgttcgccttcgacacc
gagaccaccagcctcgacgcgcagcaggcgcaactggtcggcctgtcgttcgccatcgag
ccccatgaagccgcctacgtgccgctgatgcacgactacgaaggcgccccggcgcagctg
gaccgtgaccgcgtgttgctggcgctcaagccgctgctggaaaacccggccaagggcaag
atcggccagaacgccaagtacgacatcaacatcctcgccaattgcgcgatcggcggcgat
ccggcccagggcatcgagatgcgcggcgtggcctacgacaccctgctcgaatcctacgtg
ctcaactccacggccacccgccatgacatggacagcctggccctgcgttacctggagcac
accaccatcaccttcgaagacatcgccgggcgcggtgcgaagaagctgaccttcaaccag
attccgctggaaactgccggcccctacgcggccgaagacgccgacatcactctgcgcctg
caccatgccttgcaggcgctgctggccaagaccccaagcgtgcagccggtgctgatggac
atcgagatgccgctggtgccggtgctggcgaagatcgagcgccagggcgcgctggtcgat
gccgaactgctgcgggtgcagagcagcgaactgggccagaagatggccgccctggagaaa
gaagccttcgaactggccggcgaggcattcaacctcggctcgcccaagcagcttggcgtg
atcctctacgacaagctcggcatgccgatcctcaacaagacctccaaaggccaggcctcc
accgccgaggcggtgctcgccgaactggccgagatgcaatacccgctgcccaaggtgctg
atgcagtaccgcactctgagcaagctcaagagcacctacaccgacaagctgcccgagcag
atcaatccgcgtaccgggcgcgtgcatacctcctatcagcaggcggtggcggcgaccggg
cggctgtcctccagcgacccgaacctgcagaacatcccgatccgcaccgccgaaggccgg
cgcatccgccaggccttcatcgccagccccggttacaaactgctggcggcggactactcg
cagatcgagttgcgcatcatggcccacctggccaaggacgagggcctgctgcacgcgttc
cagaacgatctggacgtgcaccgcgccacggctgcagaagtcttcggggtgccgctggag
tcggtcagcaacgaccagcggcgcagcgccaaggcgatcaacttcggccttatctacggc
atgagctcgtttggcctggcgcgccagattggcgtcgaccgcaagcagtcgcaggcgtac
atcgaccgctatttcacccagtacccgggtgtgctggcctacatggagcgcacccgcacc
caggcggccgagcaaggcttcgtcgaaaccctgttcggtcgacgtctgtacctgcccgac
atcaatgccaagaacccggccctgcgcaagggcgccgagcgcacggcgattaacgcgccg
atgcagggcacggcggccgatatcatcaagcgcgcgatggtcaccgtcgatgcctggctg
agcgagagcggcctggatgcgcgggtgattctgcaggtgcacgacgaactggtgctggag
gtacgtgaagatcaggtcgagcaggtggcgcagcagattcgcctgcacatgagcggcgcc
gcgcagctggatgtaccgctgctggtcgaggtggggattggttcgaactgggacgaggct
cactga
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