Pseudomonas cremoricolorata: LK03_06825
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Entry
LK03_06825 CDS
T03354
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw00300
Lysine biosynthesis
psw00470
D-Amino acid metabolism
psw01100
Metabolic pathways
psw01110
Biosynthesis of secondary metabolites
psw01120
Microbial metabolism in diverse environments
psw01230
Biosynthesis of amino acids
Module
psw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LK03_06825
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK03_06825
Enzymes [BR:
psw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LK03_06825
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIR88999
UniProt:
A0A089WPC3
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All DBs
Position
complement(1581196..1582443)
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AA seq
415 aa
AA seq
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MDAFNDRDGQLFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALQGASHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESADELERLQDVAAELGKQAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
LYVRAAQLPNLDVVGVDCHIGSQLTTLEPFLDALDRLLMLIDRLAECGIHLRYIDLGGGV
GVRYRDEQPPQVADYIRAVRERIGQRDLTLVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVRAVTPRGGEGLAYDLVGPICETGDFLAKDRVLDLHEGD
LLAVESAGAYGFVMSSNYNTRGRCAEVLVDGDQAFEVRRRETIPELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaacgaccgcgacggccagctgttcgcggagggtgtggccctttcggcg
atcgccgaacgcttcggtacgcccacctacgtgtattcccgtgcccacatcgaggcgcag
taccgcagctacaccgatgccctgcaaggcgcttcgcatctggtgtgcttcgccgtcaaa
gccaactccaacctgggcgtgctcaacgtactggcgcggctgggtgcaggcttcgacatc
gtttccggtggtgagctggaacgtgttctggcagccggcgggcgggctgatcgcgtggtg
ttctccggcgtcggcaagacccgcgaagacatgcgtcgcgcgctcgaggtcggtgtgcac
tgcttcaacgtcgagtccgccgacgaactggagcgtttgcaggacgtcgccgccgagctg
ggcaaacaggccccggtgtcgctgcgggtcaacccggatgtcgacgccggcacccacccg
tacatttccacgggcctgaaagagaacaagttcggcatcgccatcgccgatgccgaagca
ctgtacgtgcgcgcagcacaactgccgaacctggacgtggtcggtgtcgactgccatatc
ggctcgcagctgaccacgctggaaccgttcctcgatgctctcgatcgcctgctgatgctg
atcgaccgtctggccgagtgcggcatccacctgcgctacatcgatctgggcggcggcgtc
ggcgtgcgttaccgcgatgagcagccgccgcaggtggccgactacatccgcgccgtgcgc
gagcgcattggccagcgcgatctaaccctggtgttcgagccaggccgctacatcgtggcc
aatgccggggtactgctgacccgtgtcgagtacctcaagcacaccgagcacaaagacttc
gccatcatcgacgccgccatgaacgacctgatccgcccggcgctttaccaggcctggatg
ggtgtgcgtgcggtcaccccgcgcggcggcgaaggcctcgcctacgacctggtcgggccg
atctgcgaaaccggcgacttcctcgccaaggatcgcgtgcttgacctgcacgaaggcgac
ctgctcgccgtcgagtcggccggggcctatggcttcgtcatgagctcgaactacaacacc
cgcggccgctgcgccgaggtgctggtcgatggcgatcaggcattcgaagttcgccgccgg
gaaaccatcccagaattgttcgctggcgaaagcctgctgccggagtga
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