Pseudomonas cremoricolorata: LK03_08795
Help
Entry
LK03_08795 CDS
T03354
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LK03_08795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_08795
Enzymes [BR:
psw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LK03_08795
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LK03_08795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
PhoH
AAA_16
SLFN-g3_helicase
AAA_28
T2SSE
NTPase_1
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIR89368
UniProt:
A0A089YC33
LinkDB
All DBs
Position
1999312..2001372
Genome browser
AA seq
686 aa
AA seq
DB search
MTDLFASVDLPAPSLNTTDELFVVLQRWVERGWLRPLDVALVRFLAEHAASAQPLVLLAA
ALTSHQLGHGHVCLDLAQTLAEPDFALSLPPEGEDSHTVEILPSSVMAEVQLGPWLDALN
ASSLVAQGEHGPHDRPLVLSGERLYLRRYWTYERAVQSSLHKRLALPVEVPDDLPTRLAA
LFPPTAEPRIDWQKLACALATRAALSIITGGPGTGKTTTVVRLLALLQGPRVAAERPLRI
RLAAPTGKAAARLTESIGAQVQSLDVDPAIKARIPTEVTTVHRLLGSRPGTRHFRHHRGN
PLPLDVLVVDEASMIDLEMMANLLEALPPKARLVLLGDKDQLASVEAGAVLGDLCRDAEA
GFYSPATWAWLETVNGERLDASGLREGDEQRHVLAQQVVMLRHSRRFAEGSGIGELARAV
NEQRPADARRALAHTQFADITSCRLLGEQDTALDRLLVNGSAQGRSQAAGYRSYFDTLQR
QRPPATTALADPAWQHWAAAVLSAFDRFRILCAVRKGPWGVEAINQRATRALQAAGLIEG
DHPWYEGRPVLITRNDYGLGLMNGDIGITLRLPEAEHSERLTLRVAFPRNDGQGGVRLVL
PSRLNDVETVYAMTVHKSQGSEFEHTALILPDVLNPVLTKELVYTGITRARTWFTLVEPR
VGVFEEAVKRRVRRLSGLMLEGGQGL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctgttcgcttctgtcgacctgccggcaccgtccctgaacaccacggacgag
ctgttcgtcgtgttgcagcgctgggtcgagcgcggctggttgcgcccgctggacgtcgcc
ctggtgcgctttctggctgaacatgcggcatccgcgcaaccattggtgttgctggccgca
gcgctgaccagccaccagctaggccacgggcatgtctgcctcgatctggcgcaaaccttg
gccgagccggacttcgccctgtcgctgccgccggaaggtgaagacagccacaccgtggaa
atcctgccctcgagcgtgatggccgaggtgcaactggggccatggctcgatgctctgaac
gcttccagcctggttgcgcagggtgagcacggcccgcatgaccggcccctggtgctcagc
ggtgagcgcttgtacctgcgccgctactggacctacgagcgggcagtgcagagcagtctg
cacaagcgcctggccctgccggtggaggttccagacgacttgccgacgcgcctggcggcg
ctgtttccgcccaccgccgaaccgcgcatcgactggcagaaactcgcctgcgccctggcc
acccgagcggcgctgagcatcatcacgggcggccctggcaccggcaagaccaccaccgtg
gtgcgtctgctggcgctgttgcaaggaccgcgggtggcggccgagcggccactgcgcatt
cgcctggccgcgccgaccggcaaggcggctgcgcggcttaccgagtccattggtgcccag
gtgcagagcctcgacgtcgatccagcgatcaaggcacgcattcccaccgaggtgacgacc
gtgcatcgcctgctcggcagccgacccggcactagacacttccgccatcaccgcggcaat
ccgctgccgctggatgtgctggtggtcgacgaggcgtcgatgatcgacctggaaatgatg
gccaacctgctcgaagccctgccgcccaaggcccgcctggtgctgctgggcgacaaggac
caactggcctcggtcgaggccggggcggtgctgggcgatctgtgtcgcgatgccgaagcg
gggttctatagccctgccacgtgggcgtggctggagacggtcaacggcgagcgtctggat
gccagtggcttgcgcgagggcgatgagcagcgtcacgtactcgcgcaacaagtggtgatg
ttgcgtcattcccggcgtttcgccgaaggcagtgggatcggcgagctggcccgtgcagtc
aacgagcaacgcccggccgatgcccggcgcgccctcgcgcacacgcagttcgccgacatc
accagctgccgcctgctgggcgagcaggacaccgcgctggatcgcctgctggtcaacggc
agcgcccagggacgcagccaggctgcaggctaccggagctatttcgacaccctgcaacgc
cagcgtccccccgccaccaccgcactggccgacccagcctggcagcactgggccgctgcg
gtgctcagcgcgttcgatcgcttccggatcctctgcgccgtgcgcaagggcccttggggc
gtcgaggcgatcaaccagcgggccacccgcgccctgcaggccgccggcctgatcgaaggc
gaccacccgtggtatgaaggccgcccggtgctgatcacccgcaacgattacggtctgggc
ctgatgaacggcgacatcggcatcaccctgcgcctgcccgaagccgaacacagcgagcgc
ctcaccctgcgcgtggccttcccacgcaacgacggtcagggcggcgtacggctggtgctg
cccagccgcctcaacgatgtcgaaaccgtctacgccatgaccgtgcacaagtcccagggc
tcggagttcgagcacaccgcgctgatcttgccggacgtgctcaacccggtactgaccaaa
gagctggtctacaccggcatcacccgcgcacgcacctggttcaccctggtcgagccacgg
gtcggggtgttcgaggaggcggtgaagcggcgggtgcggcggttgagtgggttgatgttg
gagggtggtcaagggttgtga
DBGET
integrated database retrieval system
