Pseudomonas cremoricolorata: LK03_08995
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Entry
LK03_08995 CDS
T03354
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw00260
Glycine, serine and threonine metabolism
psw00460
Cyanoamino acid metabolism
psw00630
Glyoxylate and dicarboxylate metabolism
psw00670
One carbon pool by folate
psw00680
Methane metabolism
psw01100
Metabolic pathways
psw01110
Biosynthesis of secondary metabolites
psw01120
Microbial metabolism in diverse environments
psw01200
Carbon metabolism
psw01230
Biosynthesis of amino acids
psw01240
Biosynthesis of cofactors
psw04981
Folate transport and metabolism
Module
psw_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LK03_08995 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LK03_08995 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LK03_08995 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LK03_08995 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LK03_08995 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LK03_08995 (glyA)
Enzymes [BR:
psw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LK03_08995 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AIR89405
UniProt:
A0A089WJA3
LinkDB
All DBs
Position
complement(2050324..2051577)
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDAELFDAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDGNGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARSNPEIEKKLNGAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKETECRELAGWICDILADLNDEAVIDAVREKVKAICKKLPVYGQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgcagagctcttcgacgccatgcag
caggaagcgctgcgccaggaagagcacatcgagctgatcgcttcggaaaactacaccagc
cctgccgtcatggaagcccagggttcggtgctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggcggttgcgagtatgtcgacgtggtcgagcaactggccatcgac
cgtgccaaggaactgttcggcgccgattacgccaacgttcagccccacgccggttcccag
gccaacgctgcggtctacctggcgctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacgggggtcacctgacccacggcgccagcgtcagctcttcgggcaagctgtac
aacgccgtgcagtacggcatcgacggcaacggcctgatcgactacgacgaagttgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgctggtttctcggcctactcgcaggtg
ctggacttcccgcgcttccgcgccattgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgtcgcaggcctggtcgctgctggcgtctaccccaacccggtcccgttcgcc
gatgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gcccgcagcaaccccgagatcgagaagaagctcaacggcgccgtcttcccaggcgcccag
ggcggcccgctggagcacgtcatcgcggccaaggcgatctgcttcaaggaagcgctgcag
cctgagttcaaggcctaccagcaacaagtggtgaagaacgcccaggccatggccagcgtg
ttcatcgagcgcggcttcgacgtggtctccggcggtaccgaaaaccacctgttcctgctc
tcgctgatcaagcaggacatctctggcaaagacgctgacgcagcgctcggcaaagccttc
atcaccgtcaacaagaactcggtacccaacgacccacgctcgccgttcgtaacctccggc
ctgcgcttcggcaccccagccgtcaccacccgcggcttcaaggaaaccgaatgccgcgaa
ctggccggctggatctgcgacatcctcgctgacctgaacgacgaagcggtgatcgacgcc
gtgcgtgagaaggtcaaggcgatctgcaagaagctgccggtttacgggcagtaa
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