Pseudomonas cremoricolorata: LK03_11910
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Entry
LK03_11910 CDS
T03354
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psw03032
]
LK03_11910
03036 Chromosome and associated proteins [BR:
psw03036
]
LK03_11910
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_11910
DNA replication proteins [BR:
psw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LK03_11910
Chromosome and associated proteins [BR:
psw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LK03_11910
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LK03_11910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AIR89956
UniProt:
A0A089WMX8
LinkDB
All DBs
Position
2672698..2673000
Genome browser
AA seq
100 aa
AA seq
DB search
MTKSELIERIVTHQGLLSPKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRSARV
GRNPKTGQSVSLDGKYVPHFKPGKELRDRVNEEEDEVTHG
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagctgatcgaacgcattgtcacccatcaggggctgctctcgcccaag
gatgtggaattggcaatcaagaccatgcttgagcagatgtcgcagtgcctagctaccggt
gatcgcatcgagatccgtggatttggcagcttttctctgcactaccgctcagcgcgagta
gggcgtaatcccaagactggacagtcggtgagcctcgatggcaagtacgtgccgcacttc
aagccaggcaaggaactgcgtgatcgggtcaacgaagaagaagacgaagtcacccatggt
tga
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integrated database retrieval system
