Pseudomonas cremoricolorata: LK03_12540
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Entry
LK03_12540 CDS
T03354
Name
(GenBank) ATPase AAA
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw02020
Two-component system
psw02025
Biofilm formation - Pseudomonas aeruginosa
psw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK03_12540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LK03_12540
09142 Cell motility
02040 Flagellar assembly
LK03_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psw03000
]
LK03_12540
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psw02035
]
LK03_12540
Transcription factors [BR:
psw03000
]
Prokaryotic type
Helix-turn-helix
Other families
LK03_12540
Bacterial motility proteins [BR:
psw02035
]
Flagellar system
Flagellar assembly proteins
Others
LK03_12540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AIR90069
UniProt:
A0A089WSC4
LinkDB
All DBs
Position
2807246..2808721
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSDRRRDMAVVLNFLGEDNLACSSQQWQQTVESLPSSREVLCVFIGSV
DAPGGVLGQLKTVAGWDEFLPVMLLGEISSADFPDEQRRRVLSNLQMPPSYSQLLDSLHR
AQVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLETMIEAGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVAELPKKFRYIEDEDEQLVDSLRSDLEERVAINGHTPN
FASQAMLPAEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRRDGEDSAEE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagattctgctgatcgacgacgacagcgaccggcgccgcgatatg
gcggtggtgctgaactttctgggcgaagacaaccttgcctgctctagccagcaatggcag
cagacggtcgagtcattgccttcgagccgcgaggtactctgcgtgttcatcggctcggtg
gacgcgccgggcggggtccttgggcagcttaagaccgtcgcagggtgggatgagttcctc
cctgttatgcttttaggtgaaatttcttccgccgacttccccgacgagcagcgccggcgt
gtgctgtccaatctgcaaatgccgcccagctacagccagttgctcgattccctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcccgtgagcgtggccgtcagcgcgagccc
aacctgttccgcagcctggtaggcaccagccgcgccatccagcatgtgcggcagatgatg
cagcaagtcgccgacaccgacgccagtgtgctgattctcggtgaatcggggacgggcaag
gaagtcgttgcgcgcaacctgcactaccactccaagcgccgtgatgcgccgttcgtgccg
gtcaactgcggggcgattcctgccgagttgctggaaagtgagctgttcggacacgagaag
ggcgcgttcactggcgccatcaccagccgcgccgggcgtttcgagctggccaatggcggc
acgctgtttctcgacgaaatcggcgacatgccgctacctatgcaggtgaagttgctgcgc
gtgctgcaggaacgcaccttcgagcgggtcggcagcaacaagacccagagcgtggacgtg
cgcatcatcgccgcgacccacaagaacctggaaaccatgatcgaagcgggctcgttccgc
gaagacctgtattaccggctcaacgtcttccccatcgagatggccccgctgcgcgagcgc
gtcgaagacatcccgctgctgatgaacgagctgatttcgcgcatggagcatgaaaagcgc
gggtccattcgcttcaactcggcagcgatcatgtcactgtgtcggcacggctggccaggc
aacgtccgtgaactggccaacctggtcgagcgcatggcgatcatgcatccctatggggtg
atcggggtggcggagctgccgaagaaattccgctacatcgaggacgaggacgagcaactg
gtcgacagcctgcgcagcgacctcgaagagcgcgtggccatcaacggccataccccgaac
ttcgccagccaggcgatgctgccggcagaagggctcgatctgaaggactacctcgggggc
cttgaacaagggctgatccagcaggccctggacgacgccaacggcatcgtcgcccgcgct
gccgaacgcctgcgcatccgccgtaccacactggtcgagaaaatgcgcaagtacggcatg
agccgccgtgatggtgaggactcggcggaggagtag
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