Pseudomonas cremoricolorata: LK03_14285
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Entry
LK03_14285 CDS
T03354
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psw01011
]
LK03_14285
Enzymes [BR:
psw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LK03_14285
Peptidoglycan biosynthesis and degradation proteins [BR:
psw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LK03_14285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
Ribosomal_L21e
Motif
Other DBs
NCBI-ProteinID:
AIR90392
UniProt:
A0A089WUZ6
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All DBs
Position
complement(3147907..3149358)
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AA seq
483 aa
AA seq
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MSLRSRRTSHSLALRRLAQASALALTATLVGCQSAPKVAETDSVRAPDYQARIKHRPAPR
VIAPAVKPPPEDVWVRMRQGFVLQDIDVNPRIEQQRLWFASNSRSVEALGERGSLYMHFI
VERLEERDMPLELALLPAIESAYNPMAYSRAHAVGLWQFIPSTGRSFNLRQTHFYDGRRD
ITASTNAALDYLSRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPQ
ETRDYVPKLLALSQIVNTPEAYGVNLSPIANQPYFQAVTINERLDLSRVAAFADIDEDEL
IQLNPAFKKRMTVDGPQQLLVPTAKAQLLAASLSNLNPEQLVSLQPNKAVFQAALAEAKA
PAAAPAGTRSYRVKRGDNLGAIAKANRVSVRDLQRWNRLSGSSLRAGQVLALRGGNAPAA
SSAAANRVAAAQKRSTQYKVRKGDSLYLVAKRFNVEMQHLKRWNPRSGKALKPGQTLTVY
LGH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgcgcagccgcagaacctctcattccctcgccctgaggcgcctggcgcaagcc
agcgcactggccctgacagccaccctggtgggctgccagagcgcgccgaaggtcgcggag
accgacagcgttcgcgcgcccgactaccaggcgcggatcaagcacaggccggcaccgcgg
gtgatcgcccctgcggtcaagccaccaccggaggatgtctgggtgcgcatgcgccagggc
ttcgtcctgcaggacatcgacgtcaatccacgcatcgaacagcagcgcctgtggttcgcc
agcaactcgcgttcggtggaggcgctgggtgagcgtggcagcctgtacatgcacttcatc
gtagagcgtctcgaagagcgcgacatgccgctggagctggcgctgctgccagccatcgag
agcgcctacaaccccatggcctactcgcgtgcccatgcggtcggcctgtggcagttcatc
ccgtccaccgggcgcagcttcaacctgcgccagacccatttctacgacggccgacgcgac
atcaccgcctcgaccaacgccgcgctcgactacctcagccgcctgcacgacatgttcaat
ggcgactggctgctggccctggcggcctacaacgccggcgaaggcacggtgagccgggcc
atcgagcgcaacgagcgcctgggcctgccgaccgactactggaacctgccgctgccgcag
gaaacccgcgactacgtgcccaagctgctggcgctgtcgcagatcgtcaacacccctgaa
gcctacggcgtgaacctcagcccgatcgccaaccagccgtacttccaggcagtgacgatc
aacgagcgactcgacctgtcgcgggtggccgccttcgccgacatcgacgaagacgaactg
atccagctcaacccggcgttcaagaagcgcatgaccgtcgacggcccgcagcagttgctg
gtgccgacggccaaggcccagttgctggccgccagcctgtccaacctcaatcccgagcaa
ctggtcagcctgcaaccgaacaaggccgtgttccaggccgccctggccgaagccaaggcg
cctgctgccgcgccagccggcacgcgcagctaccgggtcaagcgtggtgacaacctcggt
gccatcgccaaggccaaccgcgtgtcggtacgtgacctgcagcgctggaaccgcttgtcg
ggcagcagcctgcgcgccggccaggtcctggcgctgcgcggtggcaacgcacctgccgcc
tccagcgctgccgccaaccgcgtggccgcagcacagaagcgctcaacgcaatacaaggta
cgcaagggcgattcgctgtacctggtggccaagcgcttcaacgtggaaatgcagcacctc
aagcgctggaaccctcgcagcggcaaagctctcaagccaggccagacgctgaccgtttac
ctcggtcactga
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