Pseudomonas cremoricolorata: LK03_15610
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Entry
LK03_15610 CDS
T03354
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psw03032
]
LK03_15610
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_15610
Enzymes [BR:
psw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LK03_15610
DNA replication proteins [BR:
psw03032
]
Prokaryotic type
DNA Topoisomerases
LK03_15610
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LK03_15610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4124
Motif
Other DBs
NCBI-ProteinID:
AIR90611
UniProt:
A0A089WPU9
LinkDB
All DBs
Position
complement(3350546..3351571)
Genome browser
AA seq
341 aa
AA seq
DB search
MLDCPLPASLHYVDDSHTGLTRKRWRDRFIYHDADGNRISDEPTLKRIAALAIPPAYTQV
WICVDPKGHLQATGLDARGRKQYRYHPEWRELRDAHKYGRMLAFAEALPALRKAVERDLT
RPGLDRNKVLALVVTLIDHTLIRVGNQRYLKDNQSYGLTTLRNRHAKVKGSTVRFEFRGK
RGVQHSITLRDRRLAGLVKRCQELPGQELFQYVDSDGERHRIGSSDVNQYLQALTGADFT
AKDYRTWAGSSMALSLLRPLAWQPETHAKRHVADIVKQVASRLGNTPAVCRKSYIHPAVL
EHFILGHLEAMPRSRKRKGMQMEEVALLKFLQGLEQAVVVD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactgccccctgcctgcgtcactgcactacgtcgatgacagccacaccgggctg
acccgcaaacgttggcgcgaccgcttcatttaccacgatgccgatggcaatcgcatcagt
gacgagcccaccttaaagcgcatcgccgcgctggcgattccacctgcctatacgcaggtg
tggatttgcgttgatccaaaaggccatttgcaggccactggcctcgatgcgcggggacgc
aagcaatatcgctaccaccccgagtggcgtgagctgcgtgacgcccataagtacgggcgc
atgctggccttcgctgaagcgttgcctgcgctgcgcaaggcggttgaacgcgacctcacc
cggcctgggctcgaccgaaacaaggtactggcgctggtggtgacgctgatcgatcacacg
ctgatccgcgtcggtaaccagcgctatctcaaagacaaccaatcctacgggctgaccacg
ctgcgcaatcgtcacgccaaggtcaagggcagcaccgtacgcttcgagtttcgcggcaaa
cgcggcgtgcagcacagcatcaccctgcgcgatcgacgccttgccgggctggtcaagcgc
tgtcaggaattgccgggccaggaactgtttcagtacgtggacagtgacggcgaacgtcac
cgaatcggatccagcgacgtcaaccaatacctgcaagcgctgaccggcgccgatttcacg
gccaaggattaccgcacctgggctggcagcagcatggcgctgagcctactgcgtccgctt
gcctggcagccggaaacccatgccaagcgccacgttgccgatatcgtcaagcaagtcgcc
tcgcgtctaggcaatacgcctgcggtgtgccgcaagtcgtatatccaccccgcggtgctc
gagcacttcattctgggtcatctggaagccatgccgcgttcgcgcaaacgcaagggcatg
cagatggaggaagtcgccctgctgaaattcctgcaggggttggagcaggccgttgtcgtc
gattga
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