Pseudomonas cremoricolorata: LK03_15775
Help
Entry
LK03_15775 CDS
T03354
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LK03_15775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psw02044
]
LK03_15775
Secretion system [BR:
psw02044
]
Type VI secretion system
Imp/Vas secretion system core components
LK03_15775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AIR90640
UniProt:
A0A089WN17
LinkDB
All DBs
Position
complement(3385527..3386864)
Genome browser
AA seq
445 aa
AA seq
DB search
MSSRNPVLWPEGLFVKPQHFQHAFRSGEAALHQRLASLNAAFYGFSELQLNDEYLSLGKI
AITRARGIMPDGTVFDIPADLPPPPPLEIHDDDSKDSAVYLCLPLRTEGGREVSWPDDAA
NLRYRAETQEIKDTHSADGDLVKIDLAVPNLQLKRSAQNSSAYTHLVLTRILERRPDGSL
RLDEAFYPASVSVRAVPALQRFLEEITNTLRERARNLAARIGAGGQSGIADIRDFNLLQA
MNRWWPCFLHLSRQAQIHPEQLYLCMSQACGELVTFTDETRLPQQYPAYLHTALYESFKP
LQDTLRRALSTVLQPRAVSLPLQALEYGVLTSTLEDRRLIDEAEFILAVRAHLPAHTLRQ
MFVQKAKITSLESLNELVPLQLPGIALVPLPVAPRDLPFHAGFSYFELNRRDPSWACMKS
ANGFGIHIAGDFPGLELQFWAIRSE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcgtaaccctgttctctggcctgaaggcctgttcgtcaaaccgcagcatttc
cagcatgccttcaggtctggcgaggccgcacttcatcaacgcctcgccagcctcaatgcc
gccttctatggcttcagcgaactgcagttgaacgacgaatacctgagcctcggcaagatt
gccatcactcgcgcgcgaggcatcatgcccgatggtacggtgttcgacattcccgctgac
ctgccccctccaccgccgctggaaattcacgacgacgattcaaaggacagcgcggtgtac
ttgtgcctgccattgcgcaccgagggcggccgtgaggtgagctggcccgacgatgcggcc
aatctccgttaccgcgccgagacacaagagatcaaagacacccacagtgccgacggtgac
ctggtaaagatcgacctggccgtgcccaacctgcaactcaaacgctccgcccagaacagt
agtgcctacacccatctggtcctgacacgcatccttgaacgtcgtcccgacggcagcctg
cgattggacgaagcgttttatcctgccagcgtgtcggtgcgggcagtgccggccttgcag
cgttttctcgaggaaatcaccaacaccctgcgcgagcgggcgcgcaacctcgccgcacgc
atcggggctggcggtcagtcaggcatcgccgatatccgcgacttcaacctgttgcaagcc
atgaatcgctggtggccttgtttcctgcatctgtccaggcaagcccagatccatccagaa
cagctttacctgtgcatgagccaggcctgcggtgagcttgtgacattcaccgatgaaacc
cgattgccgcagcaataccccgcctatctgcacacggcgctgtacgagtcattcaaaccc
cttcaggacaccctgcgcagagcgctgagcacggtcctgcaaccacgtgccgtatcgctg
cccctgcaggcgctggagtatggggtgctgaccagcacgctggaagaccggcgtctgatc
gacgaagcggagttcatcctcgccgtacgcgcgcacttgcctgcgcacaccttgcgccag
atgttcgtgcagaaagccaagatcacctccctggaatcgctgaacgaactggtgccactg
caactgccgggcatcgctctggtgcccttgccggtcgccccccgcgacctgcctttccac
gcgggcttcagctatttcgaactgaaccggcgtgatccgtcgtgggcatgcatgaagtcg
gccaatggcttcggtatccacatcgctggggacttccccgggcttgagctgcagttctgg
gccattaggagtgaatga
DBGET
integrated database retrieval system
