Pseudomonas cremoricolorata: LK03_15790
Help
Entry
LK03_15790 CDS
T03354
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LK03_15790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psw02044
]
LK03_15790
Secretion system [BR:
psw02044
]
Type VI secretion system
Imp/Vas secretion system core components
LK03_15790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Zn_ribbon_InsA
Globin
Motif
Other DBs
NCBI-ProteinID:
AIR90643
UniProt:
A0A089YG37
LinkDB
All DBs
Position
complement(3388249..3389265)
Genome browser
AA seq
338 aa
AA seq
DB search
MAPSDRQATADLADKLLADAHQYNFFQLLERLHGLHGDDLEPRWPDHATRLRVRLASDPR
LSFPVTDVYRAARMPGEHQRYRVCTTFMGLHGSDSPLPTYYLEQVAYEHAQGLGVRPAFF
DFFNHYLLSLLHRIWRKYRYYIRFQSGARDRFSQYIFALLGLNDQQLRGATELPWSRLLS
FAGVIASRSRAPGTVAGIIAHCFDLQQVRIREFETRAVPIAIGQRVSLGRDNGALGRTFS
IGSRTRTRSSKFVIVISGLDQTQLLDLLPSGSNFGRLRALIDFLLRDGLAYDLELHLKHN
ALSPFCLHRNQGAYLGWTSFVDDRHGAIRPVVRFRGRS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccccttcagaccggcaagcaaccgctgatctagccgacaagctgctcgccgatgcg
caccagtacaacttcttccagttgctggaacgactgcatgggctgcacggtgacgacctc
gagccgcgttggccagaccacgccacacgcctgcgcgtgcgcctggccagcgatccacgg
ctgagcttcccggtcaccgatgtctacagggcagcacggatgcccggtgagcaccagcgc
tatcgcgtatgcaccaccttcatgggcctgcacggcagcgactcgcccttacccacctac
tatctggagcaggtggcctatgaacatgcccaaggcctgggcgtgcggccggccttcttc
gatttcttcaaccactatctgctcagcctgttgcaccgcatctggcgtaaataccgctac
tacatccgcttccagtctggagcccgcgacaggttttcccagtacatctttgccctgctc
ggactcaacgaccaacagctgcgcggtgccaccgaactgccctggagtcgactgctcagc
tttgccggtgtgatcgccagccgcagccgagcacccggcacggtggccggcatcattgcc
cattgcttcgacttgcagcaggtgcggattcgcgaattcgaaacccgagcggtgcccatc
gccattggacagcgggttagcctggggcgtgacaacggtgctcttggccgcaccttctcg
atcggcagccgcacacgcactcgcagcagcaaattcgtcatcgtcatcagcggactcgac
cagacgcaactgctggatctgttgcccagcggtagcaatttcggtcgcctgcgggcgctg
atcgactttctgctacgcgatgggctggcctacgacctggagttgcacctcaagcacaac
gccctttcgccgttctgcctgcaccgcaaccagggcgcctacctgggctggaccagcttt
gtcgacgacaggcacggcgcgatccgccccgtggtgcgtttcagggggcgctcatga
DBGET
integrated database retrieval system
