Pseudomonas cremoricolorata: LK03_15805
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Entry
LK03_15805 CDS
T03354
Name
(GenBank) type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LK03_15805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psw02044
]
LK03_15805
Secretion system [BR:
psw02044
]
Type VI secretion system
Imp/Vas secretion system core components
LK03_15805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
AIR90646
UniProt:
A0A089WQ10
LinkDB
All DBs
Position
complement(3391406..3392896)
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AA seq
496 aa
AA seq
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MPEQNTIPVAADTTIDTIGHASLLEQIMAETKLMPAQEGYQVAKHGVVAFISEILKSHDP
DQLINKHRVDQMIAEVDRVLGRQMDAILHHPEFQRLESAWRSLKLLVDRTDFRENIKLEL
LHVSKEDLLDDFDNAADITCSGMYKHVYSAGYGQFGGEPVAAMLGNYDFGPSSPDIKLLN
YMASVGAMSHAPFLTASSPEFFNLSSFEELPNLKEIKDIFAGPRHAKWRAFRESEDARHV
ALTGPRFMLRSAYHPQEHPVTSFNYQEDIAGRHDNYLWGNSAFLLTSCINDSFARYRWCP
NIIGPQSGGAVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNA
AFFSANSVQKPKHFPKTPEGFQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKER
RDLESELNKWIKQYVADQENPSADVRSRRPLRAARVEVADVAGDPGWYQVSLTVRPHFKY
MGANFEISLVGRLDAQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacagaacaccattcccgtggccgccgataccaccatcgacacaattggccat
gccagcctgctcgaacaaatcatggcagaaaccaaactgatgcccgcgcaagagggatac
caagtcgccaaacacggcgtcgtggcatttatctcggaaatcctcaaaagtcatgatcca
gatcaacttataaacaaacatcgtgtcgaccagatgatcgccgaagtggatcgcgtgctg
ggcaggcaaatggatgcaattttgcatcaccctgagtttcagcgcctggagagtgcctgg
cgcagccttaaactcctggtcgaccgcacggattttcgagagaacatcaaacttgaactt
ctccatgtcagcaaagaggacctgctcgacgacttcgacaatgctgcagatatcacctgc
agtggcatgtacaagcatgtttacagcgcaggctatggccagttcggtggcgaacccgtc
gccgccatgctgggcaactatgacttcggcccctcgtcgcctgacattaaactcctgaac
tacatggcgtcggtaggcgccatgtcccacgcgccgttcctgaccgcctcctcgcccgag
ttcttcaacttgagcagcttcgaggagttgcccaacctcaaagagatcaaagacatcttc
gccgggccacgtcatgccaagtggcgtgccttccgtgagagcgaggatgcacgccacgtg
gcattgaccgggccgcgcttcatgctgcgctcggcctatcacccccaggagcatcctgtc
accagcttcaactatcaggaagatatcgcgggtcgtcacgacaactacctgtggggcaat
tcggcgttcctgctgaccagttgcatcaacgacagctttgcccgctatcgctggtgcccg
aacatcatcggtccgcaatcaggcggtgccgtcgaagacctgccggtgcatttgtatgaa
tccctggggcagttgcaggccaagatccctaccgaggtgttgatttccgatcgcaaggaa
ttcgagctggccgaagaaggcttcatcgcgctgaccatgcgcaaggacagtgacaacgcc
gcgttcttctctgccaactcggtacagaagccgaaacactttcccaagacccctgagggt
tttcaggcgcagaccaactacaagctcggcacacagctgccctacctgttcatcgtcaac
cgcctggcccactacatcaaggtgctccagcgcgagcagatcggcagctggaaggagcgt
cgcgatcttgagtcagagctcaacaagtggatcaagcagtacgtcgcagaccaagagaac
ccctctgccgacgtgcgcagccgacgaccactgcgcgccgccagggtcgaggtagcggat
gttgccggtgaccccggttggtatcaggtgtcgctcaccgttcgtccccacttcaagtac
atgggtgccaacttcgaaatctccctcgtcgggcggctggacgcgcaatga
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