Pseudomonas cremoricolorata: LK03_17140
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Entry
LK03_17140 CDS
T03354
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw01501
beta-Lactam resistance
psw02020
Two-component system
Module
psw_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK03_17140
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LK03_17140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psw02000
]
LK03_17140
01504 Antimicrobial resistance genes [BR:
psw01504
]
LK03_17140
Transporters [BR:
psw02000
]
Other transporters
Pores ion channels [TC:
1
]
LK03_17140
Antimicrobial resistance genes [BR:
psw01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
LK03_17140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
SH3_6
GCS
Motif
Other DBs
NCBI-ProteinID:
AIR90884
UniProt:
A0A089WUI1
LinkDB
All DBs
Position
complement(3700367..3701713)
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AA seq
448 aa
AA seq
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MKRVVRSAVLLPLLSVTPLALAESAQSESNGFIEDSRWNVLNRSVYDRRDYRHGGRNGSA
RNAYKPREARSDQAAEWGYGLMGSFSSGFTQGTVGVGVDAHGYLGVQLDSGGGRAGKARL
LSLDNDGHPKRDYGRAGAALKLRTSNTVLSYGEQRIKTPVFSASDSRLLPETFTGWFLDS
KEFEHLRLVAGHFTENADRNASSHKRGFAVNYSDARQGKAVDLAGAVWNPSAQFSASLYT
SRYEDTWNQHYLGSTFSHALDDQQSLSLDLNLYRTTDTGKALSGQIDNTTWSLVGRFDHG
PHGVSLGWQQVHGDTPFDYVSRGAIYIANAVQLSDFNAPNEKSWQVRYDLDMAGYGVPGL
NLSALYVRGFDIDGSHVDRNGGYAYLGYGTGGKHWERDMEARYVVQSGQAKGTTFSLRYN
THRGNTAQAELDSDQLRLAVEYPLQGGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtggtccgcagtgcggtgctgctgccgctattgagtgtcacaccgttggcc
ctggccgaatcggcgcagtccgagagcaacggtttcatcgaagacagccgctggaacgtg
ctcaaccgcagcgtctatgaccgccgcgactaccgccacggtgggcgcaacggcagcgca
cgcaacgcttacaaaccgcgcgaggcgcgcagcgaccaggccgccgaatggggctacggg
ctgatgggcagtttcagctcgggcttcacccagggcaccgtgggcgtgggcgtcgatgcc
catggctatctgggcgtgcaactggacagcggcggcggtcgagccggcaaggcgcgcctg
ctcagcctggacaacgacggccatcccaagcgcgactacggccgcgccggcgccgcgctc
aagctgcgcacctccaacaccgtgttgtcctacggcgagcagcgcatcaagaccccggtg
ttcagcgcctccgacagccgcctgctgcccgagaccttcaccggctggttcctcgacagc
aaggaattcgaacacctgcgtctggtggccggccatttcaccgagaacgccgaccgcaat
gcgtcgagccacaaacgcggtttcgcggtgaactactccgatgcgcgccagggcaaagcc
gtcgaccttgccggcgcggtgtggaaccccagtgcgcagttcagcgccagcctgtacacc
tcccgctacgaagacacctggaaccagcactacctgggcagcaccttcagccacgccctg
gacgatcagcaaagcctcagcctggacctgaacctgtaccgcaccaccgacaccggcaag
gcgctgtcggggcagatcgacaacaccacctggagcctggtcgggcgcttcgaccacggc
ccgcacggcgtcagcctcggctggcagcaagtgcatggcgataccccgttcgactacgtc
agccgcggcgccatctacattgccaacgccgtgcagctatcggacttcaacgcccccaac
gagaaatcctggcaagtgcgctacgacctcgacatggccggctacggcgtaccgggcctg
aacctcagcgcgctgtacgtgcgcggcttcgacatcgatggcagccacgtcgaccgcaac
ggcggctacgcctacctgggctatggcaccggcggcaagcactgggaacgggacatggaa
gcccgctacgtggtgcagtccggacaggccaagggcaccacgttctcgctgcgctacaac
actcaccgcggcaatactgcgcaggcggagctggacagtgatcagttgcgtctggcggtg
gagtatccgttgcagggggggttgtag
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