Pseudomonas cremoricolorata: LK03_19995
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Entry
LK03_19995 CDS
T03354
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw00071
Fatty acid degradation
psw00280
Valine, leucine and isoleucine degradation
psw00310
Lysine degradation
psw00362
Benzoate degradation
psw00380
Tryptophan metabolism
psw00410
beta-Alanine metabolism
psw00640
Propanoate metabolism
psw00650
Butanoate metabolism
psw00907
Pinene, camphor and geraniol degradation
psw00930
Caprolactam degradation
psw01100
Metabolic pathways
psw01110
Biosynthesis of secondary metabolites
psw01120
Microbial metabolism in diverse environments
psw01200
Carbon metabolism
psw01212
Fatty acid metabolism
Module
psw_M00087
beta-Oxidation
psw_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LK03_19995 (fadB)
00650 Butanoate metabolism
LK03_19995 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LK03_19995 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LK03_19995 (fadB)
00310 Lysine degradation
LK03_19995 (fadB)
00380 Tryptophan metabolism
LK03_19995 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LK03_19995 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LK03_19995 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LK03_19995 (fadB)
00930 Caprolactam degradation
LK03_19995 (fadB)
Enzymes [BR:
psw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LK03_19995 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LK03_19995 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LK03_19995 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LK03_19995 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIR91410
UniProt:
A0A089WQ24
LinkDB
All DBs
Position
complement(4342712..4344859)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELQFDLKGESVNKFNRLTLEELRQAIEAISADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGSLQANRIFSAFEDLAVPTVAAINGIALGGGLE
MCLAADYRVMASSAKIGLPEVKLGIYPGFGGTVRLPRLIGPDNAIEWIAAGKENGADDAL
KVGAVDAVVAPELLQAAALDLAKRAISGELDFKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDQIARDVQQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPVLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDTILASNTSTISINLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMADGFPDRMKDERRSAIDALYEAKRLGQKNGKGFYAYETDKRGKP
KKVADPSVLDVLKPVIYEHRELSDDDIINWMMIPLCLEVVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSVGVAEFVALADRYADLGPLYHPTAKLREMAASGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
cagttcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcgaagaattg
cgtcaggccatcgaggccatcagtgccgatgcctcggtcaagggcgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaagctgagctggtcgccggcagcctgcaggccaaccgcatcttcagcgccttcgaa
gacctcgcggtgcccaccgtcgccgcgatcaatggcatcgccctgggcggcggtctggaa
atgtgcctggctgccgactaccgagtcatggccagcagcgccaagattggcctgccggaa
gtcaaactgggcatctacccaggctttggcggcaccgtgcgcctgccgcgcctgatcggc
ccggacaatgccatcgagtggattgccgccggcaaggaaaacggcgcagacgatgccctc
aaggtcggcgcggtagacgccgtggtggcgcccgaactgctccaggctgcggccctcgat
ctggccaagcgcgccatttccggtgagctggacttcaaggccaagcgccagcccaagctc
gacaagctcaagctcaatgccatcgagcagatgatggcgttcgaaaccgccaagggcttc
gtcgcaggtcaggccgggccgaattacccggccccggtcgaggcgatcaagtcgatccag
aaagcggccaacttcggccgtgacaaggccctggaagtcgaggccgcaggcttcgccaag
ctggccaagacctcggtcgccgaaagcctgatcggcctgttcctcaacgaccaggagctc
aagcgcaaggccaaggcccacgaccagatcgcccgcgacgtgcaacaggcggctgtgctc
ggtgccggtatcatgggcggcggcatcgcctaccagtcggcggtcaagggtacgccgatc
ctgatgaaggacatccgcgaagaagccattcagttggggctcaacgaagcgtccaagctg
ctcggcaatcgcgtggaaaaaggccgcctgactccagcgaagatggccgaagcgctcaat
gcgattcgcccggtgctgtcgtatggcgacttcgccaacgtcgacatcgtggtcgaagcg
gtggtcgagaaccccaaggtcaagcaggccgtgctggccgaggtcgaagggcaggtgaag
gaagacaccatcctggcctccaacacctcgacgatctccatcaatcttctggcccaggcg
ctgaaacgtccggaaaacttcgtcggcatgcacttcttcaatccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgatgtggccgtcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtatttcggcggcttcgcccggctggtcagcgccggtgtcgac
ttcgtgcgcatcgacaaggtgatggagaagtttggctggcccatgggcccggcgtacctg
atggacgtggtcggtatcgacaccggtcaccatggccgcgacgtcatggccgacggcttc
ccggaccgcatgaaggacgagcgccgctcggcgatcgatgccttgtacgaggccaagcgc
ctgggccagaaaaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcgccgacccgagcgtgctcgatgtgcttaaaccggtgatctacgagcatcgc
gagctgagcgatgacgacatcatcaactggatgatgatcccgctttgcctggaggtcgtg
cgctgcctggaagacggcatcgtcgaaaccgccgccgaggcggacatgggcctggtctac
ggtattggcttccctcccttccgcggcggtgcgctgcgctacatcgactcggtcggtgtt
gccgaattcgtcgccctggccgatcgctatgccgacctggggccgctgtaccacccgacc
gccaagctgcgcgaaatggccgccagcggccagcgtttcttcaactga
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