Pseudomonas cremoricolorata: LK03_20550
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Entry
LK03_20550 CDS
T03354
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_20550
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LK03_20550
Archaeal homologous recombinant proteins
LK03_20550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIR91509
UniProt:
A0A089WW89
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Position
4478278..4479516
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AA seq
412 aa
AA seq
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MRLFHTSDWHLGQSLHGQDRDFEHACFLEWLLGQLQLRQPDALLIAGDLFDTVNPPVKAQ
ERLYDFIVRAHEQQPKLDIVMIAGNHDSGSRVELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNARGKVCAWCLALPFLRPAEVTGPHLGDDYLKGIATVHEQLTAAALRKRGKD
QALVAISHAHMAGGAVSEDSERSLIIGNAEALPARLFDPSIAYVALGHLHKPQKVNREER
IRYSGSPLPLSFAEINYPHQVLEVELQGAQLVSVEPRLVPRAVALLRIGPAPLDEVLAQL
AELPGPDLLQDPNHQPWLEVRVRLDEPQPDLRHQVDSALSDKAVRLVRISAEYSGAAAAD
DETEGFVELSQITPQDLFSRAWQQAYGSEVDEQTLADFAELLQDAHQHEAQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccagagcctgcacggccaggatcgc
gacttcgaacacgcctgtttcctcgaatggctgctcggccagttgcagttgcgtcaaccc
gatgcgctgctgatcgccggcgacctgttcgacaccgtcaacccgccggtcaaggcccag
gagcgcttgtacgacttcatcgtccgcgcccacgagcaacagcccaagctggacatcgtg
atgatcgccggcaaccacgattccggctcgcgggtggagctgcccgcagcgctgatgcgg
cgcctgcgcacccatgccctgggccgggtgcactggctcgacgaaggccagctcgatgcc
gagcggctgctgattccgctgaccaacgcgcgcggcaaggtctgcgcctggtgcctggcc
ttgccgttcctgcgcccggcggaagtgaccgggccgcacctgggtgacgactacctcaag
ggcatcgccacggtacacgagcaactgaccgccgcggcgctgcgcaagcgtggcaaggat
caggcgctggtggccatcagtcacgcgcacatggccggcggcgcggtctcggaagattcc
gagcgcagcctgatcatcggcaatgccgaggcgctgccggcgcggctgttcgaccccagc
atcgcctatgtcgccctgggccatctgcacaagccgcagaaggtcaaccgtgaagagcgc
atccgctacagcggctcgccgctgccgctgtcgttcgctgaaatcaattacccgcatcag
gtgctggaagtcgagctgcaaggcgcgcagctggtgagcgtcgagccgcgcctggtaccg
cgggcagtggcactgctgcgcatcggcccggcgccgctggatgaggtattggcgcaactg
gccgagctgccggggccggatttgctgcaagaccccaaccaccagccgtggctggaagtg
cgcgtgcgcctcgacgaaccgcagcctgatctgcgtcaccaggtcgacagcgccttgagc
gacaaagccgtgcgcctggtgcgcatcagcgctgagtacagcggcgctgcggctgcggat
gacgagaccgagggcttcgtcgaactcagccagatcaccccccaggacttgttcagccgc
gcctggcagcaggcctacggcagtgaggtcgacgaacagaccctggccgacttcgccgaa
ctgttgcaggacgcccaccagcacgaggcccagccatga
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