Pseudomonas cremoricolorata: LK03_20555
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Entry
LK03_20555 CDS
T03354
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_20555
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LK03_20555
Archaeal homologous recombinant proteins
LK03_20555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
nSTAND3
RsgA_GTPase
cobW
AAA_22
AAA_15
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AIR91510
UniProt:
A0A089WQC8
LinkDB
All DBs
Position
4479513..4483157
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPVDIDFTAEPLLSAGLFAITGPTGAGKSTLLDALCLALFGSVPR
LNAIAREAKVPDADGDIPTADPRNLLRRGSGSGFAEVDFIGIDGHRYRARWEANRARDKA
GGKLQASRQSLCDLDAEQLLGSGKQEYKELIETRLGLNFEQFTRAVMLAQSEFSAFLKAN
DRDRSELLEKLTNTSIYTRLGQGAFARAREAGEAHRALQERASHLLPMASEARVELDATL
DQAQQQLKAEQQRQRELEQQRAWAAELQRLQQQQHNARQALVEAQQHTESLSEQRHDVQR
LDRLAPQRHQFQRQRQLLAQLQPLGEALLAQRQQQAGVQARSGELEHALHGAREHLSQRQ
HALDEAAPRLRQAFSAEETLARLHGELETARTAAAEAERGSAALQQQQQQVQQAQQRDQH
ALQQVEQALAGSAELASLGEAWQAYRGQLQQLLQIGNRLEQGTEELPALQAQLSQASAQA
HAQQQDLELLYREAKVEPQAVAEQLQLLSGMLQDNRKQQRSVDEFTRLYSREQELQQNLQ
ALAERQQQALEQRQQLIAAGTAAKAEFTAAEQALAVIQQVLERQRLARDKSVEALREQLR
DGEPCSVCGSLEHPFHDAQALLASLGQHDQHEEDSAKVQVRQLGERLTTLRTELGVANAQ
YKDAQQQQAQLSEQWQPLDQQLRDHALWPGLDAQAESARAAWLAAQARRLEQEISHDEQR
QATLTRLQHDVAQQTAQLHAAQQAQQHAQQRLEQQRSALQADQQRLEQALADFAELLPEA
HLKALREAPAEAFLTLDRLLAERLQQLDQRHELQQAQQQREQQLQRLLDQQQHQSAQQQQ
RHTELERLDAHYQQARALLGELLGSHPSAEAWQRHLQRELEQARQGESETAQALQQAQNQ
ALQLATELKANQAREAELTVEQQQLQEAIDQWRAEHASFDDATLERLLAVDETQLGALRQ
RLLAADSALQQAAVRVQERDEWVHNHQQSATEPLPAEALQQALEDVQAKLGQLEQRCAEL
RAQQADDQRRQQASAALAADIEQAQQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQDMHERIPVQIKV
HRQGNGLSEVEVSG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccattcgcctgaagaacctggcctcgctggcaggcccggtggacatc
gacttcaccgccgagccgctgctcagcgccgggctgttcgccatcaccggacccaccggc
gccggcaagagcaccctgctcgacgccctgtgcctggcactgttcggcagcgtgccgcgg
ctcaacgccatcgcccgcgaagccaaggtgccggatgccgacggcgacattcccaccgcc
gatccacgcaacctgctgcgccgcggcagtggcagtggctttgccgaagtggatttcatc
ggcatcgacgggcaccgctaccgcgctcgctgggaagccaaccgcgcccgcgacaaggcc
ggcggcaagttgcaggccagccgccagagcctgtgcgacctcgacgccgagcaactgctg
ggcagtggcaagcaggaatacaaagagctgatcgaaacccgcctgggcctgaacttcgag
cagttcacccgcgcagtgatgctggcccaaagcgagttcagcgccttcctcaaggccaac
gaccgcgaccgcagcgagctgctggaaaaactcaccaacacctcgatctatacccgcctc
gggcaaggcgccttcgccagggcgcgggaggctggcgaggcccaccgcgccttgcaggag
cgcgccagtcacctgctgccgatggccagcgaagcccgcgtcgagctcgatgccaccctc
gaccaggcccagcagcagctcaaggccgagcaacagcgccaacgcgaactggaacagcaa
cgcgcctgggccgccgaactgcagcgcttgcagcagcaacaacacaacgcccggcaagcg
ctggtcgaggcgcagcagcataccgaatcactgagcgaacaacgtcatgacgtgcagcgt
ctggatcgtctggcgccgcagcgccaccagttccagcgccagcgccagttgctcgcgcaa
ttgcagccgctgggcgaggcgctgcttgcgcaacgccagcagcaggctggcgtgcaggcg
cgcagtggcgaactcgaacacgccctgcacggcgcccgcgagcacctgagccagcgccag
cacgccttggatgaggccgcaccgcgtctgcgccaggcgttctctgccgaggaaaccctg
gcccgcctgcacggtgagctggagaccgcgcgcactgctgctgccgaggccgagcgcggc
agcgcggccttgcagcaacagcaacagcaggtgcagcaagcgcagcagcgagaccagcac
gcattgcagcaggtcgagcaggcgttggccggcagcgccgagttggcgagtctcggcgag
gcctggcaggcctaccgtgggcagctgcaacagttgctgcaaatcggcaatcggcttgag
caaggcactgaagaactgcccgccttgcaggcacaactgagccaggccagtgcccaggcc
cacgcccagcagcaggacctggaactgctctaccgcgaggccaaggtcgagccgcaggcg
gtggccgaacagttgcagctgctaagcggcatgcttcaggacaaccgcaagcaacagcgc
agcgtcgacgagttcactcgcctctacagccgcgagcaggagctgcaacagaatctgcag
gcactcgccgagcgtcagcagcaggccctggaacagcgtcagcagttgatcgccgccggt
actgccgccaaagctgagttcaccgctgccgaacaggcgctggcggtgatccagcaggtg
ctcgaacgccagcgcctggcacgcgacaagagcgtcgaagccctgcgcgagcaactgcgt
gacggtgagccatgcagcgtctgcggcagcctcgaacaccccttccacgatgcccaggcg
ctgctcgccagcctcggccagcacgatcagcacgaagaagacagcgccaaggtccaggtg
cgccagctcggcgaacgcctcaccaccctgcgcaccgagctgggcgtggccaacgcccag
tacaaggatgcgcagcagcagcaggcgcaactgagcgagcagtggcagccactcgatcag
cagttgcgcgaccatgccctgtggcccggcctcgacgcccaggccgagtcggcccgcgcg
gcctggcttgcggcgcaggcgcggcgcctcgagcaagagatcagccacgacgaacaacgc
caggccaccctcacccgcctgcagcacgatgtcgcccagcagactgcacagctacacgct
gcccagcaggcccagcagcacgcgcaacaacgcctggagcagcagcgcagtgcgctccag
gccgatcagcagcgcctggagcaagccttggccgactttgccgagctgctgcccgaggcc
cacctcaaggccctgcgcgaagcgccggccgaggcttttctgacactcgaccgcctgctc
gccgaacgcctgcagcagctcgaccagcgccacgaattgcagcaggcccagcaacagcgc
gaacagcagttgcagcgcctgctcgatcagcagcagcaccagagcgcccaacagcaacag
cgccacactgaactcgaacgcctcgacgcccattaccagcaagcccgcgcattgctcggc
gaactgctcggcagccaccccagcgccgaagcctggcagcggcacctgcaacgggagctg
gaacaggcccgccaaggcgaaagcgaaaccgcccaggccttgcagcaggcgcagaaccaa
gccctgcaactggcgaccgaactcaaggccaaccaggcccgcgaagcggaactgaccgtc
gagcagcaacagttgcaggaggccatcgaccagtggcgtgccgagcatgccagtttcgat
gacgccaccctggagcgtctgctggcggtcgacgaaacccagctgggcgccctgcgtcag
cgcctgcttgccgccgacagcgcgctgcaacaggccgccgtgcgggtgcaagagcgtgac
gagtgggtgcacaaccatcagcagtcggccaccgagcccctgcccgccgaggcgctgcag
caagcgctggaggatgttcaggcgaagctgggccaactcgagcaacgctgcgccgagctg
cgcgcccagcaggccgacgaccagcgtcgccagcaggccagcgcggcgcttgccgctgac
atcgagcaggcccagcagcaatggcaacgctgggcgcgcctgaacgcgctgatcggctcg
gcctcaggcgatgtgttccgcaagatcgcccagggctacaacctcgacctgttgctgcac
catgccaacgcacaactgcgccagctggcccggcgctaccgcctcaaacgcggcggcagc
gccttggggctgctggtgatggatacggaaatgggcgacgaactgcgctcggtgcattcg
ctgtccggcggcgaaaccttcctggtctcgctggctctggccctgggcctggcgtcgatg
gcctcgagcaccttgcgcatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
cctgaatccctgcaactggccatggacgccctcgacggcctgcaagcccagggccgcaaa
gtggcggtgatttcccacgtgcaggacatgcacgagcgcatcccggtgcaaatcaaagtg
caccggcagggcaatggcttgagtgaggtggaggtcagcgggtga
DBGET
integrated database retrieval system
