Pseudomonas cremoricolorata: LK03_21905
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Entry
LK03_21905 CDS
T03354
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psw03009
]
LK03_21905
Enzymes [BR:
psw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LK03_21905
Ribosome biogenesis [BR:
psw03009
]
Prokaryotic type
rRNA helicases
LK03_21905
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AIR91747
UniProt:
A0A089WYM5
LinkDB
All DBs
Position
complement(4773145..4774470)
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AA seq
441 aa
AA seq
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MFSQLTLHERLLKAVAELKFVEPTPVQAAAIPLALAGRDLRVTAQTGSGKTAAFVLPMLN
RLVDLQGPRVEIRALILLPTRELAQQTLKQVQLFAQFTYIKAGLVTGGEDFKEQAAMLRK
VPDVLIGTPGRLLEQLNAGNLDLSHVQVLVLDEADRMLDMGFAEDMERLCKECANRQQTL
LFSATTGGAALRDMIGKVLNDPEHLMLNRVSQLAEGTRQQIITADHDQHKEQIVQWLLSN
ETFKKAIIFTNTRTMADRIYGHLVAKEVKAFVLHGDKDQKDRKQAIERFKEGGSKVLVAT
DVAARGLDIDGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAISLITHNDWNLMSSIER
YLKQQFERRVIKEVKGTYGGPKKVKASGKAAGVKKKKTTDKKGGDKKVAAKRKPAAKAPR
NAPLASADGMAPLKKRAPAAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaactcaccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccgaccccggtgcaggcggcggccattcccctggccctcgcagggcgtgacctg
cgggtaaccgcgcaaaccggcagtggcaagaccgccgccttcgtgctgccgatgctcaac
cgcctggtcgacctgcaaggcccgcgagtggaaatccgtgcgctgatcctgctgccgacc
cgtgagctggcccagcagaccctcaagcaagtacagctgttcgcccagttcacctacatc
aaggcgggcctggtcaccggcggtgaagacttcaaggagcaggccgcgatgctgcgcaag
gtgccggacgtgctgatcggcaccccgggccgtctactcgagcagctcaatgccggcaat
cttgacctgtcccacgtgcaggtgctggtgctggatgaggccgaccgcatgctcgacatg
ggctttgccgaagacatggagcgcctgtgcaaagagtgcgctaaccgtcagcagaccctg
ctgttctcggccaccaccggtggcgcggcgctgcgcgacatgatcggcaaggtgctgaac
gaccctgagcacctgatgctcaaccgcgtttcgcaactggctgaaggcactcgccagcag
atcatcaccgccgaccacgatcagcacaaagagcagatcgtccagtggttgttgagcaac
gagaccttcaagaaggcgatcatcttcaccaacacccggaccatggccgaccgcatctac
ggtcacctggtggccaaagaggtgaaggcgttcgtgctgcacggcgacaaggatcagaaa
gaccgcaagcaggccatcgagcgcttcaaggaaggtggctcgaaagtgctggtggccacc
gacgtggcggcgcgcggcctggacatcgacggcctcgatctggtgatcaacttcgacatg
ccgcgcagcggcgatgagtacgtgcaccgcatcggccgtaccggccgggccggcggcgag
ggtctggcgatttcgctgattacccacaacgactggaacctgatgtcgagcatcgaacgc
tacctcaagcagcagttcgagcgccgcgtcatcaaggaagtcaaaggcacctacggcggg
ccgaagaaggtcaaggcatcgggcaaggctgccggggtgaaaaagaagaaaaccaccgat
aagaaaggcggcgacaagaaggtcgcggccaagcgcaagccggcggccaaggcgccgcgc
aatgcgccattggccagtgctgacggcatggcaccactgaaaaagcgcgcgcctgcagct
gagtaa
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