Pseudoliparis swirei (Mariana hadal snailfish): 130187915
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Entry
130187915 CDS
T09868
Symbol
gabbr1a
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid type B receptor subunit 1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130187915 (gabbr1a)
04082 Neuroactive ligand signaling
130187915 (gabbr1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130187915 (gabbr1a)
G protein-coupled receptors [BR:
pswi04030
]
Metabotropic glutamate receptor family
GABA
130187915 (gabbr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
UPF0242
DUF3995
NEMP
DUF6377
Motif
Other DBs
NCBI-GeneID:
130187915
NCBI-ProteinID:
XP_056261853
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All DBs
Position
22:2776969..2842605
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AA seq
997 aa
AA seq
DB search
MTPPLLLLLCCLPSLVTTGHNSSTGGCAIIRPPRDGGIRYRGLTQEQIRSVQILPVDYEI
EYICRGNRVIVGPKVRKCLPDGSWTDMTLNSTCLLLCARVWTSLENGRVAVKPPGPPVEG
TVLHYSCHAGFILEGRNVSHCTKLGKWDVPKPTCLYDRNYTGKKKLYIGALFPMSGGWPG
GQACMPSAQMALDLVNNRSDILPDYELELIHYDSMCDPGEATKLLYDLLYTEPIKIVLLP
GCSGVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVRLFQKW
KWTRIATIQQTTEVFTSTLDDLEQRTKEAGIELSVRQSFLTDPAVAVKNLKRQDARIIVG
LFYETEARKVFCEVFKEKLYGKKYVWFLIGWYADNWFKIKDPAINCTVENMTEAVEGHVT
TEIVMLNPETVRGVSNMTSQEFIAALMSRLGGKNPEDTGGFQEAPLAYDAVWALALALNK
TVAPLKAKGRRLEDFNYNNHDITSEIYRALNTSSFEGVSGQVVFDAQGSRMAMTLIEQLQ
GGSYKKIGYYDSSQKNLSWFGNDVWIGAGPPADRTVVIEEYRFLSQKLFAAVSVFAGLGI
LFGIVCLTFNIYNGNVRYIQNSQPYLNNMTAVGCMMALAAVFPLGIDGHHVHRAQFPVVC
QFRLWLLGLGFSLAYGSMFTKIWWVHTLFTKKDEKKEKKKQHLEPWKLYATVGVLLAIDF
LSLVIWQIVDPLHVTVEKFTKEAPKEDLDVLIQPLLEHCSSVKMNTWLGVVYGYKGLLLL
LGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDASFAFAALAIV
FSAYITLVVLFVPKMRRLITRGEWQSEQQDTLKTGSSTNNNDEEKSRQLERENRELQKII
QEKEERVSALRNQLAERQALRNRRRPSSSQNQNHSDPPPSSSGPDPKSLLPPXYPNPPAD
NHALPPPSFSNSSGLYPADSKMGRNHCHNSQIPLLYK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgactccaccgctgctgctgctgctctgctgcctcccgtctctcgtgacaaccggacac
aactcatcaaccggaggctgtgctatcatccggcctcccagggacggagggatccgctac
agaggcctgacacaagaacagatccgcagtgtgcagatcctccccgtggattatgagata
gaatacatctgccgggggaaccgggtgatcgtggggcccaaggtcaggaagtgcttaccc
gacggctcctggacggacatgacgctgaacagcacgtgtctgctgctgtgcgcgcgggtg
tggacgtccctggagaacggccgcgtggcggtgaagccccccggccccccggtggagggc
acggtactgcactacagctgccacgccggcttcatcctggagggacgcaacgtcagccac
tgcaccaagctgggcaagtgggacgtccccaagcccacctgcctctacgacagaaactac
acaggcaagaagaagctgtacatcggcgcgctgttccccatgagcggcggctggccgggg
ggccaggcctgcatgccctccgcccagatggccctggacctggtgaacaaccggagcgac
atcctgccggactacgagctggagctgatccactacgacagcatgtgtgaccccggcgag
gcgaccaagctgctgtacgacctcctctacacggagcccatcaagatcgtcctgctgccg
ggatgcagcggcgtgtccacgctggtggccgaggcggcgcgcatgtggaacctcatcgtg
ctgtcgtacggctccagctcgccggcgctgtccaaccgccagcgcttccccaccttcttc
cggacgcacccgtccgccaccctccacaacccgacccgcgtgaggctcttccagaagtgg
aagtggacgcgcatcgccaccatccagcagaccaccgaagtcttcacctccactctcgac
gatctggagcagaggacgaaggaggcgggcatcgagctcagcgtacgccagagtttcctc
accgacccggctgtcgctgtcaagaacctcaagcgccaagatgcgaggatcattgtgggg
ctcttttatgagaccgaggccaggaaggtgttttgcgaggtgttcaaggagaagctctac
gggaagaagtatgtgtggttcctgatcggctggtacgcagacaactggttcaagatcaaa
gacccggcgatcaactgcacagtggagaacatgacggaggccgtggagggtcacgtgacc
accgagatcgtcatgctgaaccccgagacggtccgcggcgtctccaacatgacgtcgcag
gagttcatcgccgccttgatgtctcgtctgggggggaagaaccccgaggacaccggcggg
ttccaggaggccccgctggcctatgatgcggtctgggctctggccctggccctcaacaag
accgtggcccccctgaaggccaagggccgacgcctggaggacttcaactacaacaaccac
gacatcacctccgagatctaccgggccctcaacaccagctccttcgaaggcgtctcgggc
caagtggtgtttgatgcccagggatccaggatggcgatgactcttatcgagcaactgcaa
ggaggcagctacaagaagatcggatactacgacagctctcagaaaaacctctcctggttc
ggcaacgatgtttggataggcgccgggcctccggccgaccgcaccgtggtgatcgaggag
taccgcttcctgtctcagaagctgtttgcggccgtgtccgtgttcgccggcctcggcatc
ctgttcggcatcgtgtgtctcaccttcaacatctacaacggcaacgtgaggtacatccag
aactctcagccgtacctcaacaacatgacggccgtgggctgcatgatggcgctggccgcc
gtgttccccctgggcatcgacggccaccacgtccaccgggctcagttccccgtcgtctgc
cagttccgcctgtggctcctcggcctcggcttcagcctggcgtacggcagcatgttcacc
aagatctggtgggtgcacaccctcttcaccaagaaggacgagaagaaggagaagaagaag
caacacctggagccgtggaaactctacgcgaccgtcggcgtgctgctggccatcgacttc
ctgtccctggtgatctggcagatcgtggatcctctgcacgtgacggtggagaagttcact
aaggaggccccgaaagaagacctggacgtcctgattcagccgctgctggagcactgcagc
tcggtgaagatgaacacctggctcggtgtggtttacggctacaagggtctgctgctgctg
ctcggcatcttcctggcgtacgagaccaagtctgtctccacggagaagatcaacgaccac
cgcgccgtggggatggctatttacaacgtcgccgtgctgtgcctcatcacggctcctgtg
accatgatcttgtcctcgcagcaggacgcctccttcgccttcgccgccctcgccatcgtc
ttctccgcctacatcaccctggtggtgctcttcgttcccaagatgcggcgcctcatcact
cgcggcgagtggcagtcggagcagcaggacacgctgaagaccggatcgtccaccaacaac
aacgacgaggagaagtcacggcagctggagagagagaaccgggagctgcagaagatcatc
caggagaaagaggagcgggtgtcggcgctccgcaaccagctggcggagcgccaggctctg
cgcaaccgccgccgcccctcctccagccagaaccagaaccacagcgacccgcccccttcc
tcctccgggccggaccccaagtccctgctgcccccgnngtaccccaacccccccgcggac
aaccacgccctgccccccccctccttctccaactcctccggcctctacccggccgacagc
aagatgggccgcaaccactgccacaacagccagatcccactgctgtacaagtag
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