Pseudoliparis swirei (Mariana hadal snailfish): 130187939
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Entry
130187939 CDS
T09868
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130187939 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pswi03051
]
130187939 (psmc4)
Proteasome [BR:
pswi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130187939 (psmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
AAA_22
nSTAND3
RuvB_N
DUF815
NPHP3_N
AAA_28
RNA_helicase
AAA_14
Mg_chelatase
TIP49
NACHT
TsaE
NTPase_1
ATPase_2
NB-ARC
AAA_3
AAA_7
AAA_33
CCDC136_middle
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
AAA_18
IstB_IS21
AAA_25
AAA_24
DUF3450
ABC_tran
DivIVA
Motif
Other DBs
NCBI-GeneID:
130187939
NCBI-ProteinID:
XP_056261907
LinkDB
All DBs
Position
22:complement(3042715..3048751)
Genome browser
AA seq
417 aa
AA seq
DB search
MEDIVAVEKSPEEMPAILTSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFTTITSKMNLSEEVDLE
DYVARPDKVSGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVMKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgtagctgtagaaaagagcccggaagagatgccggcgatactgacctcc
agaccccagacgggcctttctttcctggcacccgaaccagaagatcttgaggacctttac
agcagatacaagaagctgcagcaggagctggagttcctggaggtgcaggaggagtacatc
aaagatgaacagaagaacttaaagaaagagttcctccatgcccaggaggaggtgaaaagg
atacagagcatcccgctggtcattggccagttcctggaagctgttgaccagaacacagcc
attgttggctccactacagggtccaactactatgttcgcatcctgagcaccatcgacaga
gagctgctgaagccaaacgcctcagtggctttgcacaagcacagcaacgctctggtggat
gtgctccctcctgaagccgacagcagcatcatgatgctgacgtcggaccaaaaaccagat
gtgatgtatgccgacattggtggaatggacattcaaaagcaggaagttcgagaagctgtt
gaactgccactgacacactttgagctctacaaacagattggcattgacccacccaggggt
gtgcttatgtacggacctccaggttgtggtaagaccatgttggccaaggctgtggctcac
cacactacagcggctttcatccgtgtggtgggctctgagtttgttcagaagtatttgggt
gaaggccctcgtatggtgcgcgatgtcttccggctggcaaaggaaaatgctccggccatc
atcttcattgatgagatcgatgccatcgccacaaagcgttttgatgcacagactggagct
gacagggaggtgcagagaatcttacttgagctgcttaatcagatggacggcttcgaccag
accgtcaatgtcaaggtgatcatggccaccaacagagctgacacgttggacccggccctg
ctccgtcctggtcgtctggacaggaagattgagttccctctgcccgaccgccggcagaaa
cgtctcgttttcaccacgatcaccagcaaaatgaatctctctgaggaggtcgacctggag
gactatgtggccagaccagacaaggtctctggagccgacatcaactccatctgccaggag
gctggcatgttggcagtacgtgagaacaggtatatcgtcctggccaaagacttcgaaaaa
gcttacaagaccgtcatgaaaaaggacgagcaggagcacgagttctacaagtag
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