Pseudoliparis swirei (Mariana hadal snailfish): 130187966
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Entry
130187966 CDS
T09868
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04136
Autophagy - other
pswi04140
Autophagy - animal
pswi04216
Ferroptosis
pswi04621
NOD-like receptor signaling pathway
pswi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130187966 (atg5)
04136 Autophagy - other
130187966 (atg5)
09143 Cell growth and death
04216 Ferroptosis
130187966 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130187966 (atg5)
04622 RIG-I-like receptor signaling pathway
130187966 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130187966 (atg5)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130187966 (atg5)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
130187966 (atg5)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130187966 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
Peptidase_M99
Motif
Other DBs
NCBI-GeneID:
130187966
NCBI-ProteinID:
XP_056261956
LinkDB
All DBs
Position
22:2408988..2419175
Genome browser
AA seq
275 aa
AA seq
DB search
MADDKDVLRDVWFGRIPACFTLNQDEVTEREAEPYYLLLPRVSYLTLVTDKVKKHFHKAM
RAEDVEEMWFEFEGTPLKWHNPIGVLFDLHAANTVLPWSITVHFKSFPERELLHCPSCSV
VEAHFMSGIKEADALKHKSHVVNDMQKKDHKQLWMGLQNDKFDQFWAINRKLMEYTTEEG
GFRYIPFRIYQTTGDRPFIQKLFRPTSPEGSTHTLGDLLKAMYPVALPADGEPRRYQVVI
QGIEPLLETPLQWLSEHLSHPDNFLHICVTPVPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtgctgagggacgtgtggttcggccggatcccggcctgcttc
accctgaaccaggacgaggtcaccgagagggaggcggagccctactacctgctgctgccc
agggtgagctacctgacgctggtcacggacaaggtgaagaagcacttccacaaagccatg
agggccgaggacgtggaggagatgtggttcgagttcgaagggacgccgctgaaatggcac
aatccaatcggagttctgttcgacctccacgccgccaacaccgtgttgccctggagcatc
acggtgcacttcaagagtttcccggagcgcgagctgctgcactgcccctcctgctcggtg
gtggaggctcacttcatgtcgggcatcaaggaggccgacgccctgaagcacaagagccac
gtggtcaacgacatgcagaagaaagaccacaagcagctgtggatgggcctgcagaacgat
aaattcgaccagttctgggccataaaccggaagctgatggaatataccaccgaggagggg
ggcttcagatacatccccttcaggatataccagacgacgggcgacaggcccttcatccag
aagctgtttcgtccaacatcacctgaaggcagcacgcacacactcggcgacctgctgaaa
gcgatgtacccggtggctctgccggccgacggtgagcccaggcggtaccaggtggtgatc
cagggcatcgagcctctgctggagacgcccctgcagtggctcagcgagcacctcagccac
cccgacaacttcctgcacatctgcgtcacgcccgtcccctccgactga
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