Pseudoliparis swirei (Mariana hadal snailfish): 130187972
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Entry
130187972 CDS
T09868
Symbol
si:ch211-225p5.8
Name
(RefSeq) sodium channel subunit beta-1
KO
K04845
voltage-gated sodium channel type I beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130187972 (si:ch211-225p5.8)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130187972 (si:ch211-225p5.8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130187972 (si:ch211-225p5.8)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130187972 (si:ch211-225p5.8)
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GFIT
Motif
Pfam:
V-set
ig
VEGFR1-3_N_Ig-like
KASH_SINE4
Ig_3
Phage_zn_bind_6
TelK_N
Motif
Other DBs
NCBI-GeneID:
130187972
NCBI-ProteinID:
XP_056261966
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All DBs
Position
22:3082219..3105399
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AA seq
216 aa
AA seq
DB search
MICLLTLLVVFNLFVSQCHGACAEVDSMTEAVAGEGFLLGCISCKRREEVSARTTVDWHF
KPLGEEEFRHIFHYAHPNAEILHEDFSDRLEWQGTKTRDIQIGAIYIHNVIFNDTGTYRC
TFNRVLSLRQHDEHVTVEKEVELNVVAVANRELRVVIAEIMMYVVIVVLQLWLILVLVYC
YKKISEEREARDARKALKDQAALLESKEICDEVQVE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgatttgcctcttgactcttttagttgtcttcaatcttttcgtgtctcagtgtcatggc
gcctgtgcggaggtggactccatgactgaagccgtggcgggagaaggtttcctgctgggc
tgcatctcctgcaagaggagagaggaggtgtcggcccggaccaccgtggactggcacttc
aaaccgctgggggaggaggagttcaggcatattttccactatgcccaccccaatgctgaa
atcctccatgaagatttcagcgaccgcctcgagtggcaagggacaaaaaccagagacatc
cagataggagccatttacattcataacgtcatcttcaatgacacggggacgtaccgctgc
acattcaaccgcgtcctctccctgcggcagcacgatgagcacgtcactgtggagaaggag
gtggagctcaacgtggtggccgtagccaatcgggagctgagagtggtgatcgcggagatt
atgatgtacgtggtgatcgtggttctgcagctgtggctcattctggttctggtctactgt
tacaagaagatttcggaggagcgcgaagctcgagatgcccgtaaagctctcaaggatcag
gcagcgctgttagaatcaaaagagatctgtgacgaagtgcaggtggagtga
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