Pseudoliparis swirei (Mariana hadal snailfish): 130187995
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Entry
130187995 CDS
T09868
Symbol
dop1a
Name
(RefSeq) protein dopey-1 isoform X1
KO
K26680
protein dopey
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130187995 (dop1a)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Others
Others
130187995 (dop1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOP1
Dopey_N
DOP1_C
TPR_DOP1_M
Motif
Other DBs
NCBI-GeneID:
130187995
NCBI-ProteinID:
XP_056261990
LinkDB
All DBs
Position
22:complement(19755143..19777383)
Genome browser
AA seq
2477 aa
AA seq
DB search
MNAEEVELLSDSKYRNYVAAVDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKK
LTIGKRLAQCLHPALPSGVHRKALETYEIIFKIIGPKRLAKDLFLYSSGLFPLLSNAAMS
VKPVLLGLYETYYLPLGKTLKPGLQGLLTGVLPGLEEGSEYYDRTNTLLEKVAAAVEQSA
FYSALWGSILTSPAVRLPGVSFVLLHLNRKLSMEDQLYVIGSDIELMVEAVSTSVQDSSV
LVQRSTLDLILFCFPFHMSQATRPDMIRILSAALHVVLRRDMSLNRRLYAWLLGFDNNGV
KIGPRSTRQSNPEEHASHYFNTFSKDMLVQAMVGILQGKARGGEEESILMHDLKPFRILI
SLLDKPELGPAILEDVLIEVFRTLHTQCRTELDIQNQSPFSKDQTHLSSKLRENKKTTEL
IKTANLLFNSFEPYYMWDYIARWFEECCRRTVNSNTRAPRHSGSLDHPELSLVEFCQLVD
FLLDIVSLPTRSMRVICQETYIEIQTEHLPQLLLRMVAALTAHLQALGLGELTHCLRLCS
KILSKVQPPLVSPLALPSGPQGHANPAANRSNSASGGKEDKRAGEMFEDGETPPGGRSSE
GGFTDFVQYQGDGPDESEQSAHPLRTARRSSGPSQAKPLDKPVMQCCLEHFQQFLSRLIS
LYITPGHGDKAEGGERGDVIKSGPLVSEGSQHMESCSEAGLVQREGVAAFTAACQLFLEC
SSFPVYIAEGNLNSSPTQDEQFDREQVRLPVWLQTLMDACCLAGDFSQQGVAISLLMDLV
GLTQSVAMVTAESVASGGSSDSAQSMSPSQGRVAVVIRPPLTQGILKYIADKTNFFKGVA
LILWEQLSEGTPQHHQRSVELFYQLHNLVPSSSICEDVISQQLMHRDKRIRLEAHVKFSV
LWHLTRDLNITKSSPFNRTFDRSLFIMLDSLSYWDPCTSAVGRAWLNQVLQRHDIARVLE
PLLLVLLHPKTHRVSIQRVQAQRHWAQVFPEPPEQGPSEALYTRDSGFSDNFGQTQDEMR
TQEELRGLVMGDMELFCLTVNPLSDSLSLLSLSSENLQLAGEYQHVVQQGELQSSESSGS
RSSTLENCSFEEPEFPSSTVTRSDQPPGSSCDTFKDPIEEAVSSVIKELIDHVLSLIDEG
SSFEVSSQPGHWPQTDTDSTSSDTSIGPRLDSGPPSGSNNQTLPEMLAGGTLEFFSVTRA
DVSAKDEHREGITRHSSSPSIVTLPDCSDPATPDHSLQVDDPQARKRSHSSTQLSLKGKI
MERLADKSTGAKPKVKKAKRKEEERLRKMASQAEKLRPTSIFFGDSLDLENWYSCGEGEV
SEIESDTGSPSGGSVGTVGGVGVSGRRASSAPPRFNIHPLYQHVLLYLQLYDSSRALHAL
SAIAAMLRATPSGFVSAISTTSINNTYTPQLSLLQNLLARHRVSVMGKDFYCPIPQDSHS
HSFRSAMYLEIIISLCLYFLRSYYSAHLTAGPQDLAGNRAMQLTSVEVLTLLFSELVKVT
GSSAKGFASFISDVLSKCKVQKVVLHCLLSSIFSAQKWHEQQAAGANVATVEEGLSEDSV
INLSEDQIDSCSAVQSQLLRLLQSLVVLEHRVLVPAEEGGDGAPVGGGVGGAATGGGAAF
EVLVGEVEHVNPQQPMTSLQYLHGQPITAQGMFLCAVIRALHQHHACKMHPQWIGLITAT
LPYMGRVLRRVVASVTLQLCRNLDNLLHQYRYETGLTDTRPQWMALCIPPDLILTVLEGV
TAIIHYCLQDPTSQYHQLQVSVDQKHLAEARSGILSILHTIMSSVTLLWSVLHQADSSDK
PAAASAASTSNINLGSTKNLRQQILELLGPISMNHGAHFMAAIAYVWNERKQVKTPVRNK
VIPSASEEQLLLVELVRSVSAMRTETVMQTVKEVLKQPPAIAKDKKHLSLEVCMLQFFYA
YVQRIPVSSLVDSWPSLLALLKDSVSLGLPAPGQFLILGVLNEFILKNPNLESKKDQREL
QDVTHKVVEAIGTIAGSSLEQTTWLRRNLEVKASPQIVVDGANLEADVEDLMLTVMEASS
FTPSVYSVHALTLLAEVLAHLLDMVFYSDEKEKVIPLLVNIMHYVVPYLRNHSGHNAPSY
RACIQLLSSLSGYQYTRRAWKKEAFDLFMDHTFFQMDSSCVSHWRAIIDHLMTHDKTTFR
DLMTRVAVAQSSSLSLFTNRDAELEQRAMLMKRLSFTIYSSEVDQYQKYLPDIQERLVEA
LRLPQVPILHAQVFLFFRVLLLRMSPQHLTSLWPTMITELVQVFLLMEQELTADEDISRT
SGPSVAGLETTYSGGNGFSTSYNSQRWLNLYLSACKLLDLALALPPESLPQFQMYRWAFI
PEASDDSGLEVRRQGTHQREFKPYVVRLAKLLRKRAKKNPEEDCSTRTLSWEPGHLTLTL
YVIRSMEQLLPFFNLLSQVFNSKASYRTGPAYSHNPADASFHNEGHKLESQKVFWSRARQ
NIEEMVEKDFLEGLIKT
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagaggaagtggagctgctcagtgactccaagtacaggaactatgtggcagcc
gtggacaaagccctcaagaactttgagtactccagtgagtgggccgacctcatctctgca
ctgggcaaactcaacaaggttttgcagaacaatgcgaaataccaagtggttcccaagaag
ctgacgataggcaaacgtctggcccaatgcctccacccggccctgcccagcggggtccac
cgcaaggccctggagacgtacgagatcatcttcaagatcattggacccaagaggctggcc
aaagacctctttctgtacagctctgggctcttccctttactctccaatgccgccatgtct
gtgaagccggtgctgctggggctctacgagacctactacctgcccctgggaaagactctg
aaaccgggcctacagggactgctgaccggggtcttgcctggcctggaggagggctccgag
tattacgacagaaccaacaccctgttggagaaggtggcagcggcggtggagcagtcggcc
ttctacagcgccttgtggggcagcatcctgaccagccccgctgtgcgtctccccggggtg
tcctttgttctgctgcacctcaatcgcaagctctccatggaggaccagctctacgtcatt
ggcagtgacattgagctcatggtggaggcggtcagtacctctgtccaggactccagtgtg
ctggtgcagaggagcaccctggacctgatcctcttctgcttccccttccacatgagccag
gcgactcgccccgacatgatccggatcctgtctgcagctctccacgtggttttgaggaga
gacatgtcgctcaaccgcagactctacgcctggctgctgggctttgacaacaacggggtg
aaaataggcccccgcagcacccggcagagcaacccggaggagcacgccagccactacttc
aacaccttctctaaagacatgctcgtccaggccatggtggggatattgcaaggcaaggcc
cggggcggggaagaggagagcatcctcatgcacgacctcaagccatttcgcatcctcatc
agtctgctggacaaaccggaacttggtccagcgatcctcgaggacgttctaatcgaggtg
tttcggactcttcacacacaatgccgaacagagctggacatccagaaccagagtccattc
agtaaagaccaaacacacctcagcagtaaactacgagagaacaagaagacgacagaactg
atcaaaacggccaacctgctgttcaactcgtttgagccgtactacatgtgggactacatc
gcccgctggtttgaggagtgctgcaggaggacagtgaacagcaacacacgtgcaccgcgg
cattctgggagcttggatcatccagagctctcattggtggagttctgtcagctggtcgat
ttcctgctggatattgtttctttgcctactagaagcatgagggtaatctgccaggagacc
tacatcgagatccagacggagcatcttccccagctgctgttgcgcatggtggcggctctg
accgctcacctgcaggccctgggcctcggggagctcacccactgccttcgcctctgctcc
aagatcctcagcaaagtgcagcccccgctggtgtcccctctggcgctgccatcggggccc
cagggccacgccaaccccgccgccaaccgctcaaactcggcaagcggaggcaaggaggac
aaacgggctggggagatgtttgaggacggagaaactcctcctggcggtcgctcttccgaa
ggcggcttcacggacttcgtccagtaccagggcgacggcccggatgagtcggagcaaagc
gctcacccgctcagaacggcccgccgctcctcgggcccatctcaggccaagccgctggac
aaaccggttatgcagtgctgcctggagcacttccagcagtttctctcccgactcatctcc
ttgtacattacgccggggcacggagacaaagccgaggggggggaaagaggcgacgttata
aagtcggggcccctggtttcagaaggctcccagcacatggagtcatgctcagaagccggg
ctggtccagagggagggggtcgccgccttcaccgctgcctgccagctcttcctggaatgc
tccagtttccccgtctacatcgcagagggcaatctcaactcgtcacccacgcaggacgag
cagtttgaccgggagcaggtccgtctgccagtgtggctgcagacactgatggatgcctgc
tgcctggccggggacttcagccagcagggcgtggccatctcgctcctcatggacctcgtg
gggctcacccagtcagtcgccatggtgaccgccgagagcgttgcatccgggggcagctct
gactccgcccagtccatgagccccagccagggtcgagtcgctgtcgtcatccggcctcca
ctcactcagggaatcctaaagtacatcgctgacaagacaaacttcttcaagggtgtagct
ctgatcctttgggagcagttgagtgaagggactcctcagcaccatcagcgcagcgtcgag
ctcttctaccagctccacaacctggtgccttcctccagcatctgtgaggatgtcatcagc
cagcagctcatgcacagagacaaaagaatccggctggaggcccacgtgaagttctctgtg
ctgtggcatttgactcgagacttgaacatcaccaagtcctctccttttaatcgcaccttt
gacagatctcttttcatcatgctcgacagtctgagctattgggatccgtgtactagcgct
gttggccgggcttggctcaatcaggttctccagagacatgacattgctcgggttttagag
cctctcctgctagttctgctccaccccaagacccaccgagtatccatccagagggtccag
gcccagcgccactgggcccaggtcttccctgaaccacctgaacaagggccttcagaagcc
ctttacaccagggactctggcttttcagataactttggtcagacccaagatgagatgagg
acacaggaggagctccgaggcctggtgatgggtgacatggagctgttctgtttgactgtc
aaccccctgagtgacagcctgtccttgctgagcctgagcagtgagaacttgcaactagct
ggtgaatatcagcatgtggtccaacagggggagctccagagctctgagtctagtggttct
cgatcatctacattggaaaattgtagctttgaggaaccagagtttcccagcagcacagtc
actcggtcggaccaaccgcctggttcctcctgtgacacgtttaaggaccctatagaggag
gctgtgtcctctgtcataaaagagcttatcgaccatgttttgagtttaatagacgaggga
tcctcttttgaagtctcatcacaacctggacactggccccagacggacacagacagcacc
tcctcagatacctctataggtccccgtcttgactctggacctccttcaggctccaacaac
cagactctgcccgagatgctggctggaggcacgctggagttcttctctgtcacgcgggcc
gatgtatctgcaaaggacgagcacagagagggcatcacccgtcacagctcctcgccttcc
attgtcacgttgcccgactgctccgaccccgccaccccagaccacagcctgcaggtggac
gatcctcaggcccgtaaacgtagccacagcagcacccagctcagccttaaagggaagatc
atggagaggctggcagacaaatccaccggggccaagcccaaggtcaagaaggccaagagg
aaagaggaagagaggctgagaaagatggcaagtcaagctgaaaaactgcgaccgaccagt
attttctttggggacagcctggatctagagaactggtacagctgtggggaaggtgaggtg
tcagagattgagagcgacaccggctcacccagcgggggctctgttgggactgtcggggga
gtcggtgtctcaggacgcagggcctcctccgcccctcctcgttttaacatccatcctctc
taccagcacgtcctgctctacctccagctgtacgactcctcccgggcgctccacgccctg
tcggccatcgcggccatgctccgagccactccctcggggttcgtaagtgccatctccacc
accagcatcaacaacacgtacactccgcagctgtccttgctccaaaacctcctggcccgt
cacagggtctccgtcatgggcaaagacttctactgccccatcccccaggactcccactcg
cactcattccgcagcgccatgtacctggagatcatcatctcactctgtctgtacttcctc
aggagctattactctgcccacctgaccgcaggccctcaggacctggcagggaaccgggcc
atgcagctgaccagcgtggaggtcctcacgctcctgttcagcgagctggtcaaagtcacc
ggtagctccgctaagggcttcgctagcttcatcagcgacgtcctctcgaagtgcaaagtc
cagaaagtggttctccattgcctgctctcctccatattcagcgcccagaagtggcacgag
cagcaggcggcgggggccaacgtggccacggtggaggaaggtctgtcggaggacagcgtc
atcaacctgtcggaggaccagatcgacagctgcagcgccgtccagtctcagctgctcaga
ctgctgcagagcctcgtggtcctcgagcacagagtcctggtgccggctgaagaagggggc
gatggggcgcccgtgggaggaggggtgggaggcgctgcgacgggaggcggggccgcgttc
gaggtcctggttggggaagtggagcacgtcaaccctcagcagccaatgacatcgctgcag
tatctccacggacagcctatcacagcgcagggtatgttcctgtgtgccgtgatccgtgcg
ctgcatcagcaccacgcgtgtaagatgcatccccagtggatcggactcatcacggccacc
ctgccgtacatggggagggtgctgaggagggtggtcgcctccgtcacgctgcagctgtgc
aggaacctggataatcttcttcatcagtaccgctatgagaccggactcactgacaccaga
ccccagtggatggctctctgcatccctcctgacctgattctgacggtgttggagggggtg
acggccatcatccactactgcctgcaggaccccacttcccagtaccaccagttacaagtg
agcgttgaccagaagcacttggctgaggctcgttcaggcatcctgtccatcctccacacc
atcatgtcttctgtcaccctgctgtggagcgtcctccaccaggcggacagctccgacaag
ccagctgctgcctctgctgcctccacgtccaacatcaacctgggctctacgaagaacctg
cggcagcaaatcctggagctgctgggtccaatctccatgaaccacggtgctcacttcatg
gcagccatcgcctacgtttggaatgagaggaaacaagtcaaaactccagtcagaaataag
gtgattccttcagccagtgaggagcagctgctgctggtggagctggtccgctcggtgagc
gccatgcgcacggagacggtcatgcagacggtcaaagaggtcctgaagcagccgcccgcc
attgcaaaggacaagaagcacctctctctggaggtttgcatgctgcagttcttctatgcc
tacgtccagcggatccccgtgtccagtttagttgacagctggccttctctgctggcgctg
ctgaaggactctgtgtcgttaggcctgccggcccctggacagttccttatactcggagtt
ctgaatgagttcatcttgaagaatcccaacctggagagcaagaaggaccaacgggagctg
caggacgtgacccataaggtggtggaggccatcggcaccatcgccggctcctctctggag
caaaccacgtggctgaggaggaacctggaggtgaaggcctcgccccagatagtcgtggac
ggagccaacctggaagctgatgtagaagatttaatgctcacagtgatggaggcctccagc
ttcactccatcagtgtacagcgttcacgccctcacgctgttggccgaggtgctggcccat
ctgttggacatggtgttctacagcgacgagaaggagaaggtgatcccgttgctggttaat
atcatgcactacgtggtgccctacctccgcaaccacagtggtcacaacgccccgagctac
cgggcctgcatccagctgttgagcagcctcagtgggtaccagtacacccgccgggcctgg
aagaaagaggccttcgacctcttcatggaccacaccttcttccagatggactcctcctgc
gtcagccactggagagccattattgaccacttgatgactcatgacaagaccacattcaga
gacctcatgacccgggtggctgtggcccagagcagctctctgagtctgttcaccaacaga
gacgcggagctggagcagagagccatgctgatgaaacgcctgtcgttcaccatctacagc
agtgaggtggaccagtaccagaagtacctgccagacatacaagagcgtctggtggaggcc
ctgcggctgcctcaggtgcccatccttcacgctcaggtgttcctgttcttcagagtgctg
ctgctgcgcatgtcacctcagcacctcacctcgctgtggcccaccatgatcacggagctg
gttcaggtgtttcttctcatggagcaggagctcacagccgatgaagacatatcgaggacg
tcggggccgtctgtggccgggctggagaccacctattccggtgggaacggcttctccacc
tcctacaacagccagcgctggctcaacctctatctgtcggcctgcaagctcctggacctg
gcgctggccctgccccccgagagcctgcctcagttccagatgtaccgctgggccttcatc
ccagaggcttcagatgattcagggctggaagtgagacgccaggggactcaccagagagag
tttaaaccctacgtggtccgactggccaagctgctgaggaaacgagcaaagaaaaacccc
gaggaggactgctccacccggaccctgtcctgggagccgggccacctgacgctgaccctc
tacgtgatccgcagcatggagcagctgctgcccttcttcaacctgctcagccaggtgttc
aacagcaaggccagctaccgcacaggccccgcctacagccacaacccggccgacgcctcc
ttccacaacgagggccacaagctggagagccagaaagtgttctggagccgagctcgacag
aacatcgaggagatggtggagaaggactttctagaaggcctcatcaagacgtga
DBGET
integrated database retrieval system
