Pseudoliparis swirei (Mariana hadal snailfish): 130188054
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Entry
130188054 CDS
T09868
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
pswi04810
Regulation of actin cytoskeleton
pswi05100
Bacterial invasion of epithelial cells
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130188054 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130188054 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
130188054 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130188054 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130188054 (zgc:86896)
05100 Bacterial invasion of epithelial cells
130188054 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130188054 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130188054 (zgc:86896)
Membrane trafficking [BR:
pswi04131
]
Others
Actin-binding proteins
Arp2/3 complex
130188054 (zgc:86896)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
130188054 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Rax2
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
PEP5_VPS11_N
SH3_3
Motif
Other DBs
NCBI-GeneID:
130188054
NCBI-ProteinID:
XP_056262085
LinkDB
All DBs
Position
23:23219179..23226482
Genome browser
AA seq
355 aa
AA seq
DB search
MSPMSCLEPLSCHTWNKDRTQIAVSPNNNVVNIYEKKGKEWLKIHELTEHSGRVTGIDWA
PESNRIVTCAADRNAYVWTLKDAVWKPTLVLVRINRAATCVKWSPLENKFALGSGARIIS
VCYFEKENDWWLSKHVKKAIRSTVMSLDWHPNNILLAAGSADFHCRVFSAYIKDIEDKPG
PTAWGSKMPFGELLLEHKDCGGWVHGVAFSPSGDQLALVAHNSSVTVVDAAQGKAVTQLT
TNRLPLLSVLFVSPTELVAAGHDCCPVQFSYTGPGALAFVKKLDIPKQTSRGGISAMQHF
QNLDKRAGDEDSNEQGTLHQNSITQLCVFSGQRASVQRYSSVGLDGALVLWDFKH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccatgtcctgcctggagccgctctcctgccacacctggaacaaagacaggacc
cagatcgcagtgagtccgaacaacaacgtggtgaacatctacgagaagaaagggaaagaa
tggctgaagatccacgagctgacggagcacagcgggcgcgtcacaggtatcgactgggcc
ccggagtccaaccgcatcgtgacttgcgccgccgaccgcaacgcctacgtgtggaccctg
aaggacgcggtctggaagcccaccctggtcctggtccgcatcaaccgcgccgccacctgc
gtgaagtggtcccccctggagaacaagttcgccctgggcagcggggcccgcatcatctcc
gtctgctactttgagaaggagaacgactggtggctcagtaaacatgtcaagaaggcgatc
cgctccacggtcatgagtctggactggcaccccaacaacatcctgctggcagccgggtct
gcagacttccactgcagggttttctccgcctacatcaaggacatcgaggacaagccgggc
ccgacggcgtgggggtccaagatgccgtttggggagctgctgctggagcacaaggactgt
ggggggtgggtccacggcgtggccttctcccccagcggagaccagctggccctggtggcc
cacaacagcagcgtgacggtggtggacgccgcccagggcaaggcggtcacccagctgacc
accaaccgtctgccactcctcagtgtgctcttcgtcagccccacggagctggttgccgcg
ggtcacgactgctgcccggtccagttctcctacacgggtccgggggcgctggccttcgtg
aagaagctggacatccccaagcagacctccagggggggcatctccgccatgcagcacttc
cagaacctggacaagagggccggggacgaggacagcaacgagcaggggaccctgcaccag
aacagcatcactcagctgtgtgtgttctctgggcagagggcctcggtgcagcggtacagc
agtgttggtctggatggagctctggtgctctgggactttaagcattga
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