Pseudoliparis swirei (Mariana hadal snailfish): 130188057
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Entry
130188057 CDS
T09868
Symbol
bnip1b
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130188057 (bnip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130188057 (bnip1b)
Membrane trafficking [BR:
pswi04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
130188057 (bnip1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec20
DUF4337
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
130188057
NCBI-ProteinID:
XP_056262095
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All DBs
Position
3:7684632..7689553
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AA seq
230 aa
AA seq
DB search
MASSADVHVRICGQEIIKYDLEIKALVQDIRDCPGPQSTLMELNSQVKEKFNKLRLRIQD
LEQMAREYDRETDRLSIQAETESQRRQMLSNQTAWKKANLSCKLVIDSTEKDELLFGVEH
QSTRQRKVTKESLVETSSTITESLMSMSRMMAEQVKQSEDTIGTLATSSRTVQETNEEFK
SMTGTIHLGRKLILKYNRRELTDKLLIFLAVALFLATVLYILKKRLFPFI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttccgcggatgtccacgtccgaatctgtggacaagaaattatcaaatatgac
ctagaaattaaggctctcgttcaggacatcagggattgccctggacctcagtcaactctc
atggagctcaactcgcaggtcaaagagaagttcaacaagctcagactcagaatacaggat
ctggagcagatggccagagagtatgacagagagacggacagactgtccatccaggcagag
acggagagccagcgaaggcaaatgctgagtaaccagacagcatggaagaaagctaacctg
tcgtgtaaactagtcatcgacagcacggagaaggacgagctgctgtttggagtcgaacac
cagagcaccagacaaaggaaggtgaccaaagaaagcctcgtagaaaccagcagcaccatc
acagagagtctgatgtctatgagcaggatgatggcggaacaggtgaagcagagcgaggac
actatcggcactctggccacttcctcgaggacagtgcaggaaaccaacgaggagtttaaa
agcatgacgggaaccattcacctggggaggaaactgatcctcaagtacaaccggcgggaa
ctgacggacaagctgctcatcttcctggccgtggccctcttcctcgccaccgtcctctac
atccttaagaaacgtctcttccctttcatttag
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