Pseudoliparis swirei (Mariana hadal snailfish): 130188058
Help
Entry
130188058 CDS
T09868
Symbol
gspt1l
Name
(RefSeq) G1 to S phase transition 1, like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130188058 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130188058 (gspt1l)
03012 Translation factors [BR:
pswi03012
]
130188058 (gspt1l)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130188058 (gspt1l)
Translation factors [BR:
pswi03012
]
Eukaryotic type
Release factors
130188058 (gspt1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
130188058
NCBI-ProteinID:
XP_056262091
LinkDB
All DBs
Position
23:23533757..23544728
Genome browser
AA seq
580 aa
AA seq
DB search
MDARDTAPDSWEQEADVEASPGGQLYSALLALNVNARPFVPNVNAAEFVPVFTANAPSKN
EDSAVVVEKISSMEAPESAAPVVNGDSALTTEDPWDQKEEEPTREEPGGEDQEPSMATTE
ETAAPEMMMEEEEEEEETPAPKGPAPQTHAPKKEHINVVFIGHVDAGKSTIGGQIMYLTG
MVDKRTLDKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRASFETEQRHFTILDA
PGHKSFVPNMIGGVSQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLV
NKMDDPTVNWSLDRYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPTDLCPWY
TGLPFISHLDSLPHFKRSTDGPVRLPIVDKYKDMGTVILGKLESGSIFKTQQLVMMPNRH
VVELLSLLSDDVETDDAQPGENLKLRLKGIEEEEILPGFILCNAENLCHTGRTFDAQIVI
IEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRT
AGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagagacactgcccctgattcctgggaacaagaggccgacgtggaggcctcg
ccgggcgggcagctgtactccgcgctgctggccctcaacgtcaacgccaggcccttcgtg
cccaacgtcaacgccgcggagtttgttcctgtttttaccgcgaacgcgccttcgaaaaac
gaggattctgccgttgtcgttgagaagatatccagcatggaggcgccagaaagtgccgct
ccagtggtaaacggggactcggcgctgaccacagaggatccgtgggaccagaaagaggag
gagccaactagggaggagccaggaggcgaggaccaggaaccatctatggcgactacagag
gagacggcggctccagagatgatgatggaggaggaggaggaggaggaggagacgccggcg
cctaaaggaccagcgccgcagacccacgcccccaagaaggagcacatcaacgtggtcttc
atcggacacgtcgatgctggtaaatctacgatcggcggtcagatcatgtatctcacgggc
atggtggacaagagaaccttggataagtacgagagggaagcaaaggagaagaaccgggaa
acctggtacctgtcctgggctctggacaccaaccaggaggagcgggacaagggcaagacg
gtggaggtgggccgggcctccttcgagacggagcagaggcacttcaccatcctggacgct
ccgggtcacaagagcttcgtgcccaacatgatcggaggagtgtcgcaggccgacctggcc
gtgctggtgatctctgcccggaaaggagagtttgagacgggctttgagaagggaggccag
acgagggagcacgccatgctggccaagaccgccggagtcaagcacctgatcgtcctggtg
aacaagatggacgaccccacggtcaactggagcctggacaggtatgaggagtgcaaggag
aagctggttccattcctgaagaaggtgggcttcaaccccaagaaggacatttacttcatg
ccgtgctccggactgacgggggccaacctgaaggagcccacggacctgtgcccctggtac
acagggttgcccttcatttcacacctggacagtttgccacatttcaagaggtcgacggac
ggccccgtcaggctgcccatcgtcgacaagtacaaggacatgggcactgtgattctgggc
aaactggagtcgggctccatcttcaaaacccagcagctggtcatgatgccgaaccggcac
gtggtggagctgctgagcctcctgtccgacgacgtggagacggacgacgcccagccggga
gagaacctcaagctgcggctcaagggcatcgaggaggaggagatcctgccgggcttcatc
ctgtgcaacgcagagaacctctgccacaccgggcgcaccttcgacgcccagatcgtcatc
atcgaacacaagtccatcatctgtcccgggtacaacgccgtgctgcacatccacacctgc
atcgaggaagtgcagatcacagccttaatctgcctggtggacaagaagacgggggacaag
agtaagacccggccccgcttcgtgaagcaggaccaggtctgcatcgcccggctgcgcacc
gcagggaccatctgcctcgagaccttcaaggacttcccccagatgggccgcttcacccta
cgggacgaaggtaagaccatcgccatcggcaaggtgctgaagctcgtcgccgagcgggac
tga
DBGET
integrated database retrieval system
