KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130188084
Entry
130188084         CDS       T09868                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130188084 (atxn2l)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130188084 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 130188084
NCBI-ProteinID: XP_056262139
LinkDB
Position
23:complement(1601801..1617647)
AA seq 931 aa
MHMTKKTRNTMKPPSQSSPLSSIVFEGVYNNARMLHFLTAVVGSTCDVRVKNGAAYEGIF
KTLSSQCELAVDAVHKQSDGGGEEEEEGGQSSPPKIEDITDMMIFSPGDLVTMTCRDVDL
NFAVRDTFTDTSISSSRVNGENREKVLQRWDGNGNGENFELEADTSNGWDANEMFKFNEE
TYGVKSTYDASLSMYTMPLEKGTSEVFRQREARAARLANEIEGSLQYRRRVSLENDEGRS
EEDKYSSVVREERAGPGATSSRRVLVQRRPHDLLVLLLANETRCFILYSSPSSSSSSSSR
EGKYIPLPQRAREIGLSGRTGASGRTPPPPFSRHAAPGSERSSPPRSLHAADGAAPRSAV
NGVTSRTSPKTQRLQSSRTLRTPNTQTSSTVSRAPKADAPLDLLPVGGPVFLDSSSVAVA
TGSKSSGLTPLFPIDVNEILSTAAKERTEGLSEGKPCKAPTVQQRNQLEELRKFGKEFRL
QPTSSPSASPASADPPPLSSASSSSSSSPAPPPKPGTSSAQDLQQVAEVGPTFTAPGSFG
PEGQRSGPSPGGEDGERPEAAATAQVKNSTLNPNAKEFLPIKVNIIQKPPPTPTPPRPTP
PSPSLVLAHPGQPGGGAIYSNPPGHYLSYVSPLHLQGHQMQAPQMYQYTMSTVNQGKFPR
AKGPVVGQRPEHHASQASSMISAAASAAGPPLVASPYPQSYLQYGQMIQALPTHFHGQPV
YSMLQGGARMLTSGAPPQQMGPPGPQYPGQAEGQQQAIYAQSFSHHSGALHHPQPSSTPT
GNQPPPQHSAPSPGHNQPGPAGPQPQSMFHSGGLQNPAPPGLPPGHSAPQASYSMQGYGL
PGHQPLAHGFPSISQLTQAHVAGGLSGPHHSGGHGLPPVMLHYVSPQQGAGANPQHGPQQ
GAPQHFYIGHPQALQVQAHPTQQLSFHPSAN
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgcacatgactaaaaagacgaggaacacaatgaaaccgccgtcacagagctccccttta
agcagcatagtgtttgaaggcgtctacaacaatgcccgaatgctccacttcctcactgcc
gtcgtgggctccacctgtgacgtgagggtgaagaacggagccgcgtacgaaggaatcttc
aagactttgagctctcagtgtgagctggctgtggacgctgtgcacaaacagagcgatgga
ggaggagaggaggaggaggaaggaggccagtcctctcctcccaagattgaggacatcacc
gacatgatgatcttcagccccggtgacctggtcaccatgacgtgccgcgacgtggacctg
aacttcgccgtcagagacacgttcacggacacgtccatcagctcgtcacgcgtgaacgga
gaaaaccgagagaaagttctccagaggtgggacgggaacgggaacggagagaactttgag
ctggaggcggacacgtccaacggttgggacgctaacgagatgttcaagttcaacgaggag
acgtacggcgtgaagtccacatacgacgccagcctctccatgtacaccatgcctctggag
aaggggacctccgaggtgttccggcagcgcgaggcgcgcgccgcccggctggccaatgag
atcgagggcagcctgcagtaccgccgcagggtctccctggagaacgacgaggggcgcagc
gaggaggacaagtacagctcggtggtccgggaggagcgggccgggcccggggccacgagc
agcaggcgagtcctggtccagaggaggcctcacgacctcctggtgctgctgctggctaac
gagacacgctgctttattctttactcctccccctcctcctcctcctcctcctcctccagg
gaggggaagtacatccctctccctcagcgggcgagagagatcgggctgtcgggcagaacc
ggagcgtcgggtcgcacgccgccgccgccgttctctcgtcacgcggcgccgggctctgag
cgcagcagcccgccgcgctcgctccacgccgccgacggcgccgcaccgcgctcggccgtc
aacggagtcacgtccagaacttcccccaaaacccagagactgcagagcagcaggaccctg
aggacccccaacacccagacctcctccacagtctctcgggctcctaaagccgatgccccc
ctggacctacttcctgtgggcgggcccgtgttcttggactcctcgtccgttgccgtggcc
accggctccaaatcctccgggctgacgcccctcttccccatcgatgtgaacgagatcctg
agcacggcggcgaaggagcggaccgaaggtctgtctgaggggaagccctgcaaagctccc
acggtgcagcagaggaaccagctggaggagctgcgcaagttcggcaaggagttcaggctg
cagcccacctcctctccgtcagcgagcccggcctctgcagaccctcctccgctcagctcc
gcctcctcctcttcctcctcctcccccgcgccgccgcccaaacccggcacctcctctgcc
caagacctgcagcaagtggcggaggtcggcccgaccttcacggccccagggtccttcggg
ccggagggtcagcggtccgggccgagccccggcggcgaagacggcgagcggcccgaggct
gcagcgacagcgcaagtgaaaaactccacgttgaatccaaatgcgaaagaattcctcccc
atcaaagtgaacatcatccagaagcctccgccgacgcccactcctccacggccgacgccc
cccagcccctcattggtcctggctcatccagggcaaccaggaggcggagccatctacagc
aacccacctggacactacctgtcctacgtctccccgctccacctgcagggccaccagatg
caggctcctcagatgtatcagtacacgatgtcgactgtcaaccagggaaaattccccaga
gccaaaggcccggtggtgggccagcgtccggagcaccacgcctctcaggcctcctccatg
atctcagctgcagcctcggcggcgggaccccccctggtggcctcgccgtacccccagtcc
tacctgcagtacggtcagatgatccaggccctgcccacccacttccacggacagcccgtg
tactcgatgctccaggggggagccaggatgctgacctccggtgcccccccccagcagatg
ggtcctccgggcccccagtaccccggccaggctgagggccaacaacaggccatatatgcc
cagtccttctcccaccactcgggggcgctgcaccaccctcagccctccagcacccccact
gggaaccagccgcccccccagcactcggctcccagtccgggacacaaccagcccggcccg
gcagggcctcagcctcagtccatgttccactctggaggtctgcagaacccggcgccgccc
ggcctaccgccgggccacagcgccccccaggcctcctacagcatgcagggctacggcctc
ccggggcaccagcctctggcccacggcttcccctccatcagccagctcacgcaggcccac
gttgccggcggtctctctggtccgcatcactctgggggtcacggcctgccgcccgtcatg
ctgcactacgtctccccccagcagggggctggcgccaacccccaacacggcccccagcag
ggggcgccgcagcacttctacatcggacacccacaagctcttcaggtccaggctcacccg
acccagcagctgtccttccacccgtctgccaactga

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