Pseudoliparis swirei (Mariana hadal snailfish): 130188086
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Entry
130188086 CDS
T09868
Symbol
znf598
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130188086 (znf598)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130188086 (znf598)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130188086 (znf598)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf_C2H2_ZNF598
zf-C2H2_13
zf-C3HC4_3
zf-C2H2_4
Zn_ribbon_IFT122
Motif
Other DBs
NCBI-GeneID:
130188086
NCBI-ProteinID:
XP_056262146
LinkDB
All DBs
Position
23:4872138..4880345
Genome browser
AA seq
936 aa
AA seq
DB search
MSSRTSKETTEKHCVLCCQEVNIFALGKCDHPVCYRCSTKMRVLCDQKYCAVCREELDKV
VFVKNLAAFSSLPYQQFPCEKTHDIYFCDEKIFAKYRHLLLPECLRCSEPKAFSKFEELE
YHMRKQHELFCCKLCSKHLKIFSHERKWYNRKELARHRAHGDPDDTSHRGHPLCKFCDDR
YLDNDELLKHLRRDHYFCHFCDADGSQEYYSDYPYLSEHFKESHYLCEEGRCADEQFTHA
FRSEIDYKAHKAAAHSKNRAEARQNRHIDVQFNYTRQTRRNEGMLSGEDYDELRQRRGGG
GGGGRGRPHGGQKSWRYSREEEDREVAAAMRASMAQCRQEERGPMQERGPMQERSAPKHC
REERTERADPEDPKNRTGLIKPTSKPPVRTMKSSNPGDEEDDFPALGAKAAPTIVKPAPA
MVTTAHAALKEDDFPSLSTVAVASPMTPAYSAQQRNTSSFHEEDFPALVSKIRPLKHAAG
NKSAWSNHTAAAKAQPLPPPPSRPSPPLSSVSSGPQLLSSSSNSSSLRMKKMSQEKEIPT
RSPPPPSRDDGVGGLTQQEFRSVPTMLEISSLLTVKGGKSKPSAVAPDPPNPTPIPDPFT
SKASKKKKQQKNMAAAASPPPSSMSGTTQTVNTISVETAAQKENVPEKSWNKAPPASAGT
ATLMANGHPEKSPPVRKEAVATTPHPKADPPLEQEEEEEDFPALMTKKPPPGFKSSFPLK
ASAPASVMPPPPPGLGISAPKPPPGFTGIPLNSNVVEPAAPAVNPPPKVSSTAYLVPNDF
NQRNLELIQSIRKYLHNDESTFNEFKNYSAQFRQSVISAVQYHGSCKDLLGEDFNRIFSE
LLVLLPDTGKQQELLSAHGDSRALEKQSVAGGGKKNKKNAWQIPTTMANAAAELDCQVCP
TCRQVLAPKDFNSHKTMHIRDNEDFPSLQSISRIIS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagaaccagcaaagaaaccacagagaagcactgcgtcctgtgctgccaagag
gtcaacatcttcgccttgggaaaatgcgaccacccggtgtgctaccgctgctccaccaaa
atgagagtgctgtgcgaccagaagtactgcgccgtctgccgggaagagctcgacaaggtg
gtgtttgtgaagaacctggcggccttctcgtctctgccctaccaacagttcccctgtgag
aagacgcatgacatctatttctgtgacgagaagatcttcgccaaatacagacatctgctg
ttgccagagtgcctccgctgttcagaaccgaaggccttctccaagttcgaggagctggag
tatcacatgaggaagcagcacgagctcttctgctgcaagctctgctcgaagcatctcaag
atcttctcccatgagcgtaaatggtacaaccgcaaggaactggcacgtcaccgagcgcac
ggagatccggacgacaccagccacagaggacacccgctctgcaagttctgcgatgaccgt
taccttgacaacgatgagctgctgaagcacttgcgcagggaccactacttctgccatttc
tgtgacgcggatggttctcaggaatattacagcgattacccgtacctgagcgagcatttc
aaagagagtcactacctgtgtgaggagggccgctgtgccgacgaacagttcacccatgca
ttccgctccgagatcgactacaaggcccacaaagccgcggcgcacagcaagaaccgagca
gaggcccgacagaaccgccacatcgacgtgcagtttaactacacaagacaaacgaggaga
aatgaaggaatgctgtcgggtgaggattatgacgagctgcgtcagaggaggggaggagga
ggaggaggaggaagaggaaggcctcatgggggacagaagagctggaggtattcccgagag
gaagaggacagggaggtggcagctgccatgagggcatccatggcgcagtgtaggcaggag
gagagaggaccgatgcaggagagaggaccgatgcaggagaggagcgctcccaaacactgc
agggaggagaggaccgagagagccgacccagaagaccccaaaaacaggacgggactcatc
aaaccaacaagcaaacctccagtacgaacaatgaagagctctaatcccggggatgaagaa
gatgacttcccagctttaggagccaaagcggccccgaccattgtaaaaccagctcctgcg
atggtaacaacagcccatgccgctttgaaggaagacgacttcccgagcctctccaccgtg
gcggtcgcgtctcccatgacgccggcttactccgcccaacagaggaacacttcctctttc
cacgaggaggatttccccgcgcttgtgtccaaaattcggcccctcaaacatgcggctggc
aacaaatctgcttggtccaaccataccgctgcagctaaagcccaacctctccctcccccg
ccctccaggccgtcccctcctctctcgtctgtgtcctctggccctcagctcctctcctct
tcctccaactcctcatccttgcggatgaaaaagatgtcacaggagaaagaaatacctact
cggtctcctcctcctccatctcgcgacgatggtgtcggagggttgacgcagcaggagttc
cgctcggtgcccaccatgttggagatctcctctctgctcaccgtcaaagggggcaaaagc
aaaccctccgctgtggcccccgaccctccaaacccgacccccatccccgatcctttcacc
tctaaagccagcaagaagaaaaaacagcagaagaacatggccgccgcggcctccccgccc
ccgtcttcaatgtcggggacgacgcaaactgtgaacacgatctccgtggagacggcggcg
caaaaggagaacgtccccgagaagagttggaacaaagccccccccgccagtgctgggacg
gcgactctgatggcgaacggacaccccgagaagtcaccgcccgttcggaaggaggccgtc
gcgacaactcctcatcccaaagcggacccccctcttgagcaggaggaggaggaggaggac
ttccctgctctcatgaccaagaagccaccaccaggcttcaagtcctctttcccgctgaag
gcttcagcaccggcctccgtcatgcccccacctccacccggcctggggatctccgcccct
aaacctcccccgggcttcaccgggatccccctgaacagcaacgtggtggagcccgcggcg
cccgcggtcaacccaccccccaaggtgtcgagcaccgcttacctggtgcccaacgacttc
aaccagaggaacctggagctgatccagtccattaggaagtacctccacaacgacgagtcg
acgttcaacgagttcaaaaactactctgcccagttcagacagagtgtgatatcagcggtc
cagtaccacggcagctgtaaggacctgctcggagaagactttaaccgcatcttcagcgag
ctgctggtcctcctgccggacaccggcaagcagcaggagctcctgagcgcccacggagac
agcagggcgctggagaagcagtcggtcgccggaggcgggaagaagaacaagaagaacgcc
tggcagatcccgaccaccatggcgaacgcggcggccgagctggactgccaggtgtgcccc
acttgcagacaggtacttgccccgaaagacttcaactcccacaagaccatgcacatccgg
gataacgaggacttcccttctttgcagtcaattagccgtatcatcagctag
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