Pseudoliparis swirei (Mariana hadal snailfish): 130188123
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Entry
130188123 CDS
T09868
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130188123 (si:ch211-106h11.1)
Ion channels [BR:
pswi04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
130188123 (si:ch211-106h11.1)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_9
Motif
Other DBs
NCBI-GeneID:
130188123
NCBI-ProteinID:
XP_056262211
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Position
23:19690449..19697869
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AA seq
892 aa
AA seq
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MFSLSELAPLNQHQGRCKLLKPWWEVFMDYLVVLMLMASVLACTEQLSRDRVVCIPMDPV
ITVNASNRSPSTSGQAPTPAHDPRGAGPNLHSTGRGRRTHLAYQQYVYISQVCYHEALPL
CSRFFPYMAMLQCLMLVASGSFWLHFPHTSARIEHFLAILSKCCESPWTSQALSHAVRQE
SIREKEEEEVVEERGPPQPPPSSSPPPVTRMGRTSIDSGTDSPLLKRSCSASCGAPPSPC
PSTLSCNSAMSSTPVGCPVHFPSSDRVVVDSPRQVVSLGRSDGEQARALFERVRRFRSHC
ESSDVIYKVYSAQTVFKLLMVTLILSYTIPLLSSLSFTHTCHPEEEALVGYSTFECIHVL
SSLLRKLLVAYLTLLGLYGLLNFYTLGWILHSSLRQYSFHSLKEPCSLRDVPDLRNDLAF
LLHMLDQYDPLLAQRLSVFLSPVSESRLLGESFERCWGEEKLRAMTSVDSEGCSRLQLVA
LPRLPPALFALSQLQVLQLELIADARFTAQVANMTSLRKLHLYHCTAAVDPGALGVLQEH
LEVLHLTFTQASEIPGWVLSLRGLHELHLCGRLSNDGAVGRGWALGSLRQLRHLRALVIR
GALQRIPGELCEVAGSLARLEIHNEGTRLLVLTGLKRMADLTELLLQDCRLERLPSALLA
LGNLRKLDLQHNNLRTLEELLSLAHLRRLSCLRLAYNRILALPASVGALRGLELLDLSNN
QLQGLPPALFTLRRLRRLLLAGNLLEVLPAEVKALQLLTELDLSGNRVESLPPQLFSSCL
ELHVLNVARNSLGSLPSGVAALSRLCRLDLRSNSLEELPAELGCCSGLQGGGLLVEDWLF
LSLPPQVRNFLRRSPRAPSGSHSERHSRPDSESFPYFSPTQWSFSSALESQI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtcggagctggcgcctctgaaccagcatcagggtcggtgtaaactgttg
aagccctggtgggaggtcttcatggactacctggtggtcctgatgctgatggcatccgtc
ctggcttgtacggagcagctgtccagggatcgagtggtgtgcattcccatggatccagtt
atcactgtgaacgccagcaatcgcagtccctccactagcgggcaagcaccgactccagct
catgatccacgcggcgccggcccaaatcttcactctacaggccggggtagacgcacacac
ctggcctaccagcagtatgtttacattagccaggtgtgctaccatgaggcgttgcctctg
tgctcccgcttcttcccgtacatggccatgctgcagtgcctcatgctggtcgccagcggc
tccttctggctccacttcccccacacctccgcccgcatagagcacttcctggcaattttg
tcaaagtgctgcgagtcgccttggacctctcaagccttgtctcacgccgtccggcaggag
agcatccgagagaaggaggaggaggaggtggtggaggagagaggaccgccccagcctcct
ccctcttcatctccacctcctgtaacacgcatgggacgcacgagcatagactcgggcacg
gacagcccgcttctgaagaggtcctgtagtgcgtcctgtggcgcccctccctccccgtgc
ccgtccaccctctcctgtaactccgccatgtcgtctacacccgtcgggtgcccggtgcac
tttccttcctccgaccgtgtcgtggtggacagtcccaggcaggtggtgagtctgggtaga
agtgacggggaacaggccagggcgctgttcgaaagggtcaggagattccggtcgcactgc
gaaagctcggatgtcatctataaggtctactcggctcagacggtattcaagttgctgatg
gtgacgctgatcttgagttacaccatccctcttctcagctccctctccttcacccacacc
tgccaccctgaggaggaggccttggtgggctactcgaccttcgagtgtatccacgtgctc
tcctccctcctacgcaagctgctggtggcgtacctgaccctgctggggctgtacggcctg
ctcaacttctacaccctcggctggattttacacagctctctacggcagtattccttccac
tcgctgaaggagccgtgctccctgagagatgtccccgacctgaggaacgacctggccttt
ctcctccacatgttggaccagtacgaccctctgctggcccagcgtctatccgtctttttg
tctcccgtcagcgagagccggctgctgggggaaagcttcgagagatgctggggggaggag
aagctgcgtgccatgacgagcgtggactcggagggctgctccagactgcagctggtggcc
cttcctcgcctccctccggccctcttcgccctcagccagcttcaggtcctccaactggag
ctcatcgccgatgccaggttcaccgcacaggtggccaacatgacctcgctcaggaagctc
cacctctatcactgcacggcagcggtggatcccggtgcactgggagtcctccaggaacat
ctggaggtcctccacctcacctttacccaggcgtcggagatccccggctgggtcctctcc
ctccgcggcctgcacgagctccacctctgcggccgcctgagcaatgacggcgcggtgggc
cgcggctgggcgttggggagcctccgccagctgcgtcacctccgcgcgctggtgatccga
ggtgcgctgcagcggatccccggggagctgtgcgaggtggccggcagcttggcgaggctg
gagatccacaacgagggcaccaggctgctggtgctgacgggcctgaagcgcatggccgac
ctcaccgagctgctgctgcaggactgccggctggagcgcttgccctcggccctgctggct
ctcggcaacctgcggaagctcgacctgcagcacaataacttgaggactctggaggagctg
ctcagtctggctcacctgcgccgcctttcgtgcctccggctcgcctacaaccgtattctg
gcactgccggccagcgtcggggcgctgcgaggcctggagctcctggatctctccaacaac
cagcttcagggcctccccccggcgctcttcactctgcggcgccttcgcaggctcctgctg
gctggtaacctgctggaggtgctgcccgcggaggtgaaggcgctgcagctgctcacagag
ctggacctgagcgggaaccgggtggagagccttccccctcagctcttcagtagctgtttg
gagctgcacgtcctgaacgtggctcgcaactctctcggctcgttacccagcggggttgcg
gctctaagtcggttgtgcaggttggacttgcgcagcaacagtctggaggaactgcccgcc
gagctgggctgctgctcagggctgcagggaggcggtctcctggtggaagactggctgttt
ctatctctgcctccacaggtcaggaacttcctgagacgttctcctcgcgccccctccggt
tctcactcagagcgtcattcccgcccagattcggagagtttcccatacttctctccgacc
cagtggagtttctcttctgctctggaatcacagatataa
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