Pseudoliparis swirei (Mariana hadal snailfish): 130188206
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Entry
130188206 CDS
T09868
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130188206 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130188206 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pswi04031
]
130188206 (rhot1a)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
130188206 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
130188206 (rhot1a)
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rho Family
Miro
130188206 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
EF-hand_1
Arf
RsgA_GTPase
MMR_HSR1
AAA_22
EF-hand_8
AAA
AAA_25
AAA_5
Motif
Other DBs
NCBI-GeneID:
130188206
NCBI-ProteinID:
XP_056262398
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All DBs
Position
23:9043149..9061275
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AA seq
660 aa
AA seq
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MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSYWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYQDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
LKPSCIKSLTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLAPQALEDVKNVVRRNMADG
VKDNGLSLQGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPMIKMPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEEVKDLFKVFPYMPWGPDVNHTVGTNEQGWITYQ
GYLSQWTLTTYLDVQRSLEYLGYLGYSIIYEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGDRGSGKSGFLQAFLGKNLQGQRRIREDHKSFYAISTTYVYGQEKYLLLHEVMPDF
DFLSEADLACDVVCLVYDVNNPSSFEYCAKVYKQHFMDSKTPCVVLAAKSDLHEVRQHYS
LSPHEFCRKHKLHPPQPFTCSMTDAPNKDIYTRITTMAMYPHARLRCMCASSRCTYCLCQ
NLLKLELLRSFKARLRRVLFNRHMAQADLKNSTFWLRASVGATVFAVLGFAMYRALLKHR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatactacttgtaggggaacccaaggtggggaagacgtcgctg
ataatgtctctggttagtgaggagtttcctgatgaggttcctctccgagctgaagagatc
accatcccagccgatgtcaccccagagagggtgcccacacacatagtggactactcggag
gcagaacagtcggacgagcagctgtaccaagaaatatcaaaggcaaatgtgatctgcata
gtttactcggtcaacaacaagaagtccattgaaaaggtgaccagctactggattccactc
ataaatgacagaacggacaaggatagcagggtaccgttgatccttgtgggcaacaagtcg
gacctggtggaacacagcagcatggagaccatcctgccaatcatgaatcaataccaggat
atcgagacctgtgtagagtgctctgccaaaaacctgaagaacatctccgagctgttctac
tacgcccaaaaggctgttctccacccgacaggacccctgtactgcccagaggagaaggag
ttgaagccttcttgcattaagtcgttaactagaatcttcaaagtgtctgacctggacaac
gacggcatcctcaatgacaacgagctcaacttcttccagagaacctgtttcaacacgccg
ctggcgcctcaggccttagaggatgtaaagaacgtggtcaggaggaacatggcggacgga
gtcaaggacaacggactttcacttcaaggcttcctgttcctgcacactctcttcatacag
cgaggccgacacgagaccacctggacggtgctgcggaggtttggttatgacgacgacctg
gagctcacacaggagtacctgttccccatgatcaagatgcccccagactgcaccacagag
ctgaaccacaatgcttacctcttcctccagagtgtctttgacaagcacgacaaagacagg
gactgtgcgctgtcgccagaggaggtgaaggacttgttcaaagtgttcccctacatgccc
tggggtcccgacgtcaaccacacggttggcaccaacgaacagggatggatcacataccag
ggatacctctcccagtggacgttaacaacatatttagatgtccagcgtagtttggagtac
ttgggttaccttggctactctatcatctatgaacaggagtcccaagctgcagccatcaca
gtgacgcgtaacaagcgcatcgatctgcagaagaaacagacccagcgcagcgtcttccgc
tgcaacgtcctgggggaccgaggcagcgggaagagcggcttcctccaagccttcctgggc
aagaacctgcagggacagaggcggattagagaagaccacaagtccttctatgccatcagc
accacctatgtttacggtcaggagaagtacctgctgctccatgaggtgatgcccgatttt
gacttcctgtccgaggcggacctcgcctgtgacgtggtctgcctggtgtacgacgtcaac
aatccgagctcttttgaatactgcgccaaagtgtacaagcaacacttcatggacagcaag
acgccgtgcgtggtgctcgccgccaagtcggacctgcacgaggtacggcagcactacagc
ctctcgccgcacgagttctgccgtaagcacaagctccacccgccccagccgttcacatgc
agcatgaccgacgcacccaacaaagacatctacacgagaatcaccaccatggccatgtat
ccccacgcccgcctccgctgcatgtgcgcctccagcaggtgcacgtactgcctgtgtcag
aacctcctcaagttggagctgctgcgcagttttaaggcccgactccgacgggtcctgttc
aacaggcacatggctcaggccgacctgaagaactccaccttctggctgcgagcgagcgtc
ggggcgacggtgttcgccgtgctgggcttcgccatgtacagagcgctgctcaaacaccgg
tga
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