Pseudoliparis swirei (Mariana hadal snailfish): 130188275
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Entry
130188275 CDS
T09868
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130188275 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pswi04031
]
130188275 (rab40c)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
130188275 (rab40c)
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
130188275 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130188275
NCBI-ProteinID:
XP_056262521
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Position
23:complement(2090915..2106109)
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AA seq
286 aa
AA seq
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MGDAMVSKGSKGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKT
TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID
EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRI
VLMRHGMEKFWKPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLRSFSMANGMNA
VMMHGRSYSLASPVGGAKGNSLKRSKSIRLPRSPPQNCTRNNCKIS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgccatggtcagcaagggcagcaagggcagcccggtgaagagctacgactac
ctgctcaagttcctcctggtgggcgacagcgacgtgggcaaaggagagatcctggacagc
ctgcaggacggatcggccgagtccccttacgcgtacagcagtggtattgactataaaacc
accaccatccttctggacgggaggagagtgaagctggagctctgggacacgtccggtcag
gggaggttctgcaccatcttccgctcgtactcccgtggcgctcaggggatcctgctggtc
tatgacatcaccaaccgctggtcgtttgacgggatcgaccgctggatccgagagatcgac
gagcatgcccctggcgtgccccggatcctggtcgggaaccgcctgcacctggccttcaag
cggcaggtccccacggagcaggcgagggcgtacgccgagaagaacggcatgaccttcttc
gaggtcagcccgctgtgcaacttcaacgtcatcgagtcgttcaccgagctgtcgcgcatc
gtgctcatgcggcacggcatggagaagttctggaagcccaacagagtgttcagcctgcag
gacctgtgctgccgggccatcgtgtcgtgcacgccggtccacctcatcgacaagctgccg
ctgccggtggccatcaagtcccacctgcgctccttctccatggccaacggcatgaacgcc
gtcatgatgcacggccgctcctattcgctggccagcccggtgggcggagccaagggcaac
agcctcaagaggtccaagtccatccggctgccgcgcagcccgccgcagaactgcacccgc
aacaactgtaagatctcctaa
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integrated database retrieval system
