Pseudoliparis swirei (Mariana hadal snailfish): 130188305
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Entry
130188305 CDS
T09868
Symbol
rac1b
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1b
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04145
Phagosome
pswi04148
Efferocytosis
pswi04310
Wnt signaling pathway
pswi04370
VEGF signaling pathway
pswi04510
Focal adhesion
pswi04520
Adherens junction
pswi04530
Tight junction
pswi04620
Toll-like receptor signaling pathway
pswi04810
Regulation of actin cytoskeleton
pswi05100
Bacterial invasion of epithelial cells
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130188305 (rac1b)
04310 Wnt signaling pathway
130188305 (rac1b)
04370 VEGF signaling pathway
130188305 (rac1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130188305 (rac1b)
04148 Efferocytosis
130188305 (rac1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130188305 (rac1b)
04520 Adherens junction
130188305 (rac1b)
04530 Tight junction
130188305 (rac1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130188305 (rac1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130188305 (rac1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130188305 (rac1b)
05100 Bacterial invasion of epithelial cells
130188305 (rac1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130188305 (rac1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130188305 (rac1b)
04031 GTP-binding proteins [BR:
pswi04031
]
130188305 (rac1b)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
130188305 (rac1b)
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
130188305 (rac1b)
Macropinocytosis
Ras GTPases
130188305 (rac1b)
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
130188305 (rac1b)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130188305 (rac1b)
Exosomal proteins of other body fluids (saliva and urine)
130188305 (rac1b)
Exosomal proteins of colorectal cancer cells
130188305 (rac1b)
Exosomal proteins of bladder cancer cells
130188305 (rac1b)
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
130188305 (rac1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
130188305
NCBI-ProteinID:
XP_056262563
LinkDB
All DBs
Position
23:10577207..10582229
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLSPITYPQGLAMAKEIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKKRRKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccataaagtgtgtcgttgttggagacggggcggtgggtaagacctgcctgctc
atcagctacaccaccaatgcctttcctggagagtatatccccacagtgttcgacaactat
tccgccaatgttatggttgatgggaagccggtgaacctgggtctctgggatacagcaggg
caagaagattacgacagactccgcccactttcctatccacaaacggatgtttttctcatc
tgcttctcgcttgtgagtcctgcctcttttgaaaacgtccgtgccaagtggtaccctgag
gtgagacaccattgtcccaacactcccatcatcctggtggggaccaagctggatctgaga
gatgacaaggacaccatagagaagctgaaggagaagaaactctctccaattacatatccc
caaggactggcgatggccaaagaaatcggttccgtcaagtacctggagtgctcagccttg
actcaacgcggccttaaaactgtgttcgacgaggccatccgggccgtcctctgccctcca
cccgtcaagaagaagaggaggaagtgctctctcctctaa
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