KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130188345
Entry
130188345         CDS       T09868                                 
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
  KO
K17908  autophagy-related protein 18
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04136  Autophagy - other
pswi04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130188345 (wipi1)
   04136 Autophagy - other
    130188345 (wipi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pswi04131]
    130188345 (wipi1)
   03029 Mitochondrial biogenesis [BR:pswi03029]
    130188345 (wipi1)
Membrane trafficking [BR:pswi04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    130188345 (wipi1)
Mitochondrial biogenesis [BR:pswi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    130188345 (wipi1)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WD40_MABP1-WDR62_2nd WD40 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RSE1_2nd WDR55 BCAS3_WD40 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 130188345
NCBI-ProteinID: XP_056262634
LinkDB
Position
23:23233209..23244267
AA seq 464 aa
METGEGSGVSSGPGGPDGPGPRAGCASFNQDSTSLAVGMQTGYKLFSLTAVETLDCVHES
ESPEVYIVERLFSSSLVVVVSVSTPRRMDIYHFKKGTEICSHSYPEHVLSVKLNRQRLVV
CLDESIYIHNIKDMKLLKTLLSTPSNPSGLCALSINHSNSYLAYPGSATVGEIVVYDANN
LNTVTMIPAHDSPLAALAFNASATRLASASERGTVIRVFSVPEGLRLFEFRRGMKRYVSI
SSLSFSPDGLFLCASSNTETVHIFKLEQLGPRCSVCSGGDEASSWTAYVGKMLLAASSYL
PAQVSGMMSQDRAFATVHLGASAQRNICSLAIIQKLPRLLVATADGQLLIYNVDPLEGGE
CTAAHTHRLFGAGGDQGEGSEAEGSEVTGPEQACPSYAATAALPASGPVTATLTGYSEDG
GAKRGEVIPEHELAAGPVCLDDENEFPPINWCRDGTGGGPARRC
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggagaccggagaggggtccggtgtgtccagtgggcccggcgggccggatggacccggg
ccgcgggccggctgcgcctccttcaaccaagactccacgtctctggctgtggggatgcag
acgggctacaagctgttctctctgaccgccgtggagacgctggactgtgtccatgagagc
gagagtccagaggtgtacatcgtggagcgtctgttctccagcagcctggtggtggtggtg
agcgtctccacgccgcgccgcatggacatctaccacttcaagaagggcacggagatctgc
agccacagctaccccgagcacgtcctgtccgtcaagctcaaccgacagaggctggtggtc
tgcctggatgaatccatctacatccacaacatcaaagacatgaagctgctcaagactctg
ctcagcacgccgtccaacccctcaggtctctgtgctctctccatcaaccactccaactcc
tacctggcgtaccccggcagcgccaccgtcggggagatcgtggtgtacgatgccaacaac
ctgaacaccgtgaccatgatcccggctcacgacagtcctctggcggcgctcgccttcaac
gcctcggccaccagactcgccagcgcctctgagaggggcaccgtgatccgagtgttctcc
gtacccgagggcctgcgtctgtttgagttccgccggggcatgaagaggtatgtcagtatc
agctctctgtccttcagcccagacggactcttcctctgtgcgtccagcaacacagagaca
gtacacatctttaaactggagcagctggggccaaggtgctctgtgtgcagcgggggggac
gaggcctccagctggacggcctacgtggggaagatgttgttggcggccagcagctacctg
cccgcccaggtgtccggcatgatgagccaggaccgcgccttcgccaccgtccacctgggg
gcgtcggcccagaggaacatctgcagcctggccatcatccagaagcttccacggctgctg
gtggccacggccgacggccagctgctcatctacaacgtggaccccctggaggggggcgag
tgcacggcggcacacacacacaggcttttcggtgccggtggtgatcagggtgaaggatcg
gaggcagaggggtcagaggtcacagggccagaacaggcctgtccatcctacgctgcgacc
gctgccttaccggcctcgggccccgtcacggcaaccctcaccggctactctgaagacggc
ggagcaaagaggggcgaggtcatcccggagcacgagctggccgccggtcccgtgtgtctg
gatgacgagaacgagtttcctcctattaattggtgccgagacgggaccggaggaggcccg
gcccggcgctgctga

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