Pseudoliparis swirei (Mariana hadal snailfish): 130188345
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Entry
130188345 CDS
T09868
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04136
Autophagy - other
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130188345 (wipi1)
04136 Autophagy - other
130188345 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130188345 (wipi1)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130188345 (wipi1)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
130188345 (wipi1)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130188345 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
WDR55
BCAS3_WD40
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
130188345
NCBI-ProteinID:
XP_056262634
LinkDB
All DBs
Position
23:23233209..23244267
Genome browser
AA seq
464 aa
AA seq
DB search
METGEGSGVSSGPGGPDGPGPRAGCASFNQDSTSLAVGMQTGYKLFSLTAVETLDCVHES
ESPEVYIVERLFSSSLVVVVSVSTPRRMDIYHFKKGTEICSHSYPEHVLSVKLNRQRLVV
CLDESIYIHNIKDMKLLKTLLSTPSNPSGLCALSINHSNSYLAYPGSATVGEIVVYDANN
LNTVTMIPAHDSPLAALAFNASATRLASASERGTVIRVFSVPEGLRLFEFRRGMKRYVSI
SSLSFSPDGLFLCASSNTETVHIFKLEQLGPRCSVCSGGDEASSWTAYVGKMLLAASSYL
PAQVSGMMSQDRAFATVHLGASAQRNICSLAIIQKLPRLLVATADGQLLIYNVDPLEGGE
CTAAHTHRLFGAGGDQGEGSEAEGSEVTGPEQACPSYAATAALPASGPVTATLTGYSEDG
GAKRGEVIPEHELAAGPVCLDDENEFPPINWCRDGTGGGPARRC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagaggggtccggtgtgtccagtgggcccggcgggccggatggacccggg
ccgcgggccggctgcgcctccttcaaccaagactccacgtctctggctgtggggatgcag
acgggctacaagctgttctctctgaccgccgtggagacgctggactgtgtccatgagagc
gagagtccagaggtgtacatcgtggagcgtctgttctccagcagcctggtggtggtggtg
agcgtctccacgccgcgccgcatggacatctaccacttcaagaagggcacggagatctgc
agccacagctaccccgagcacgtcctgtccgtcaagctcaaccgacagaggctggtggtc
tgcctggatgaatccatctacatccacaacatcaaagacatgaagctgctcaagactctg
ctcagcacgccgtccaacccctcaggtctctgtgctctctccatcaaccactccaactcc
tacctggcgtaccccggcagcgccaccgtcggggagatcgtggtgtacgatgccaacaac
ctgaacaccgtgaccatgatcccggctcacgacagtcctctggcggcgctcgccttcaac
gcctcggccaccagactcgccagcgcctctgagaggggcaccgtgatccgagtgttctcc
gtacccgagggcctgcgtctgtttgagttccgccggggcatgaagaggtatgtcagtatc
agctctctgtccttcagcccagacggactcttcctctgtgcgtccagcaacacagagaca
gtacacatctttaaactggagcagctggggccaaggtgctctgtgtgcagcgggggggac
gaggcctccagctggacggcctacgtggggaagatgttgttggcggccagcagctacctg
cccgcccaggtgtccggcatgatgagccaggaccgcgccttcgccaccgtccacctgggg
gcgtcggcccagaggaacatctgcagcctggccatcatccagaagcttccacggctgctg
gtggccacggccgacggccagctgctcatctacaacgtggaccccctggaggggggcgag
tgcacggcggcacacacacacaggcttttcggtgccggtggtgatcagggtgaaggatcg
gaggcagaggggtcagaggtcacagggccagaacaggcctgtccatcctacgctgcgacc
gctgccttaccggcctcgggccccgtcacggcaaccctcaccggctactctgaagacggc
ggagcaaagaggggcgaggtcatcccggagcacgagctggccgccggtcccgtgtgtctg
gatgacgagaacgagtttcctcctattaattggtgccgagacgggaccggaggaggcccg
gcccggcgctgctga
DBGET
integrated database retrieval system
