Pseudoliparis swirei (Mariana hadal snailfish): 130188447
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Entry
130188447 CDS
T09868
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pswi00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pswi01100
Metabolic pathways
Module
pswi_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130188447
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
130188447
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130188447
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
130188447
Glycosyltransferases [BR:
pswi01003
]
O-Glycan biosynthesis
Glycosaminoglycan
130188447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
130188447
NCBI-ProteinID:
XP_056262794
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All DBs
Position
23:complement(2036092..2055711)
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AA seq
851 aa
AA seq
DB search
MNRDGHRSGDSQDVDRSHRPKEKLRPDSNNNENSVPKDFDSIDSNSNLGARSQRQRAPNG
KRKPDKAQSMLGKPANEALKFPPVQPRGAGGHNHNRSTHGRKPHPRAPTVSAPVRGSDRE
PALRRAKKPSTPAPPGSEPRKEQPRCEIAGKEAISALSRARSRECRQQIVEVYCKHKDRA
LMPEKVPRYCPIEGKANVNVQWDEDPSDGAQLVPARIAFVLVVHGRASRQFQRLFKAIYH
TSHYYYIHVDLRSNYLYREVLSLAGRYPNVRVTPWRMSTIWGGASLLTMYLRSMEDLLQM
SDWSWDFFINLSAADYPIRTNQQLVAFLSKYRGKNFIKSHGRDNARFIRKQGLDRLFYEC
DTHMWRLGDRKIPEGIAVDGGSDWFLLNRPFVDYVVNSRDELVGSMKRFYTYTLLPAESF
FHTVLENSAHCETMVDNNLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDIPRFQQAS
RPTFFARKFEASVSQAAVEQLDSFLFGPYPPGTPGLHAYWENLYEGETDGLAGLSDAALS
HHHAFARMGLARAAGSLQGHPHDNSCRFIAMNHPVSVHLYFLSDQFQGYLVRHAATNRAS
AQQESLETWVTPKDHFSLASPAPPTNRLQHVQVGADWDPKERLFRNWGGLLGPADEPVAV
QRWSRGQSNLTATVVWVDPTNVIAATYDILVDGGTEVTHYRPPLSPPLRPGLWVLRVLHH
WNPLGQTTFVVAPLEFHRQQPVLLEDALRLHAGPPRNSYMEQSFHGLNPVLRLPVSLGAV
EEAEANAGLTGAPLRRWLDRLLGGHWSASDVCSMGPSACPVMQRCLRTGWSSASPDTKSQ
LGPPTADGRIR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgatggacatcgttcaggagactctcaggacgtcgaccgctcccaccggccc
aaagagaagctccggccggacagcaacaacaacgagaactcggtccccaaagacttcgac
tccatcgacagcaacagcaacctgggagctcgatctcagcgccagcgagcgcccaacggc
aagcgcaagccggacaaggcgcaaagcatgctgggaaaacccgccaacgaggcgctcaag
ttccctcccgtccaaccgcgaggggcgggcggccacaaccacaaccgcagcacccacggc
cgtaagccacacccccgggcgccaacggtctcggcgccggtccgagggtccgaccgtgag
ccggcgctccgccgggcgaagaagccgtccacgccggcgccgcccggttcggagcccagg
aaagagcagccgcgctgcgagatcgccgggaaggaagccatctccgctctgtccagggcc
aggagccgggagtgccggcagcagatcgtggaggtctactgcaaacacaaagaccgggcg
ctgatgcccgagaaagtgcctcgctactgccccatcgaaggaaaggctaatgtcaacgtc
cagtgggacgaggacccctcggacggcgcccagctggttccggctcggatcgccttcgtc
ctggtcgtccacggccgagcctcgcgccagttccagcgtctcttcaaagccatctaccac
acctcgcactactactacatccacgtggacctgaggtccaactacctctacagagaggtg
ctgtctctggccggccgctatcccaacgtccgggtgactccctggaggatgtccaccatc
tggggcggggccagcctgttgaccatgtacctgcgcagcatggaggaccttctccagatg
tccgactggtcctgggacttcttcatcaacctcagcgctgcagactaccccatcaggacc
aatcagcagctggtggcgttcctgtcaaagtaccgcggcaagaacttcatcaaatctcac
ggcagagacaacgctcgcttcatccgtaaacagggtctggaccgactcttctacgagtgc
gacacacacatgtggcgcctcggggaccgcaagatcccagagggcattgcggtggacgga
ggctctgattggttcctgctcaaccggcccttcgtggactacgtggtcaactccagagac
gagctggtcggcagcatgaagcgcttctacacctacacactgctgcctgcagagtccttc
ttccacaccgtgctggagaacagcgcccactgtgagaccatggtggacaacaacctgcgg
ctcaccaactggaaccgcaagctgggatgtaaatgccagtacaagcacatcgtggactgg
tgcggctgctcgcccaatgacttcaagccctcagacattccccgcttccagcaggcctcc
agaccaacgttcttcgcccggaagttcgaggccagcgtgagccaggcggcggtggagcag
ctggactccttcctgttcgggccgtacccgccgggcacgccgggcctccacgcctactgg
gagaacctctacgagggcgagacggacggcctggccggcctgtcggacgccgcgctcagc
caccaccacgccttcgcccgcatggggctggcgcgcgccgccggctcgctgcagggccat
ccccatgacaacagctgcaggttcatcgccatgaaccacccggtgtcggtgcacctgtac
ttcctgtccgaccagttccagggctacctggtgcggcacgcggccaccaaccgggcctcc
gcccagcaggagagcctggagacctgggtgacccccaaggaccacttcagcctggccagc
cccgccccccccaccaaccggctgcagcacgtccaggtgggggcggactgggacccgaag
gagcgcctcttcaggaactgggggggtctgctgggccccgcggacgagccggtggccgtg
cagcgctggagccgtggccagagcaacctgacggccaccgtggtgtgggtggaccccacc
aacgtcatcgccgccacctacgacatcctggtggacggcggcaccgaggtcacccactac
cggccccccctcagccccccgctcaggcccgggctgtgggtgctccgggtgctgcaccac
tggaacccgctgggccagaccaccttcgtggtggcgccgctggagttccaccgccagcag
ccggtactgctagaggacgccctgcggctgcacgccggcccccccaggaactcctacatg
gagcagagtttccacggcctgaacccggtgctgcggctgccggtgagcctcggcgccgtg
gaggaggccgaggccaacgccggcctgacgggggcgccgctgcgccgctggctggaccgg
ctgctggggggccactggtccgcctcggacgtctgctccatggggcccagcgcctgcccc
gtcatgcagcgctgcctccgcaccggctggagctcagccagccccgacaccaagtcccaa
ctgggcccgcccacagccgacgggaggatcaggtag
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