Pseudoliparis swirei (Mariana hadal snailfish): 130188450
Help
Entry
130188450 CDS
T09868
Symbol
ift70
Name
(RefSeq) tetratricopeptide repeat protein 30A
KO
K19683
tetratricopeptide repeat protein 30
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130188450 (ift70)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
130188450 (ift70)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
ANAPC3
TPR_1
TPR_6
TPR_16
TPR_CcmH_CycH
TPR_Slam
ARM_TT21_C
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
130188450
NCBI-ProteinID:
XP_056262798
LinkDB
All DBs
Position
23:complement(2148328..2168597)
Genome browser
AA seq
622 aa
AA seq
DB search
MTAIKDGEHTATIYKLIKESQYVEAIHILNGQLQKHTKSRAALSLLGFCYYHIQDFTNSA
DCYEQLAQLHPEVEEYKVYYAQSLYKAGAYPEATRASFALDNPSSHVKMLKLQACVKYCE
EDYSAAKSLLEQLPQEDPDYGYNVGCLLYQDGKHEEACKKFSSAMQVLGYVPALSYNIAL
CHYSLKNYPQALKYIGEIIEQGIREHPVKGAQEALTDMPPRSEEELDPVTLHNQALVNMH
SRPSEGFKKLSFLLQQPSFPPVTFGNLLLLYCRHEYFDLAADVLAEKAHLTYKFLSPVRV
TVHVDASLTCPTAPEEAFRKFDEMNGKLTEQLRKQAKQVQEARLARDDEAQKKTLLENDL
MQEKYIVVLMAQAKIYWNRDNFQMVEKIFRKSVEVCNEDDTWKLNVAHVLFVQSKYKEAI
GFYEPIVKKHYDNVEQCNIQECPCKSKPSILNVNAMVLANLCVSYILTSQNEEAEELMRK
IEKEEEQISYDDPDKKVFHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYNKKLGTDTW
FYAKHCFLSLLENMSKHMVMLRDAVVQECIQFLEHCEAYGKEVLATIEQPLEETHVHIGK
NTVTYEARLLKALFYEVIGWNK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacggctataaaagacggagagcacacggctacgatctacaaactgattaaagaaagc
cagtatgtggaagctattcacatcctgaacggacaacttcagaaacacacaaagtcccgg
gcggcgctgtctcttctgggtttctgctactatcacatccaggatttcaccaactctgca
gattgctacgagcagctggcccagctgcacccggaggtggaggagtacaaggtgtactac
gcccagtccctctacaaagccggggcctaccccgaggccacgcgggcctccttcgcgctg
gacaaccccagcagtcacgtgaagatgctgaagctgcaagcctgtgtcaaatactgcgag
gaggattactcggccgccaagtcgctgctggagcagctgccccaggaggacccggactac
ggctacaacgtgggctgcctgctctaccaggacggcaagcacgaggaggcctgcaagaag
ttctcgtctgccatgcaagtgctgggatacgtgccagcgctgtcctacaacatcgccctg
tgccactacagcctgaagaactaccctcaggccctcaagtacatcggggagatcatcgag
cagggcatccgggagcacccagtgaaaggagctcaggaggctttgaccgacatgcccccc
cgatcagaggaggagctggacccagtgaccctccacaaccaggccctggtgaacatgcac
agcaggccctctgaggggttcaagaagctctccttcctgctgcagcagccctccttcccc
cccgtcaccttcgggaacctgctgctgctctactgcaggcacgagtacttcgacctggcc
gctgacgtcctggcagaaaaagctcatctcacctacaagttcctctcaccggtacgagtc
accgttcatgtcgatgcctctctgacgtgccccacagcaccggaggaggccttcaggaag
tttgacgagatgaacggaaaactgacggagcagctgaggaagcaggccaagcaggtgcag
gaggcccggctggctcgagacgacgaggcccagaagaaaactctgctggagaacgacctg
atgcaggagaagtacatcgtggtcctgatggcccaggccaagatctactggaaccgggac
aacttccagatggtggagaagatcttccgcaagtcggtggaggtgtgcaacgaggacgac
acgtggaagctgaacgtggcccacgtgctcttcgtgcagagcaagtacaaggaggccatc
ggcttctacgagcccatcgtgaagaagcactacgacaacgtggagcagtgtaacattcag
gagtgtccctgcaagagcaaaccctcgatcctcaatgtgaatgccatggtcctggccaac
ctgtgtgtctcctacatcctgacatcccagaatgaggaggctgaagagctgatgaggaag
atcgagaaagaggaggagcagatctcctacgacgaccccgacaagaaggtcttccacctc
tgcatcgtcaacctggtcatcgggacgctgtactgcgccaaagggaactacgacttcggg
atctctcgcgtcatcaagagcctggagccctacaacaagaagctggggacagacacgtgg
ttctacgccaagcactgcttcctgtctctgctggagaacatgtccaagcacatggtcatg
ctgcgggacgccgtggtgcaggagtgcatccagttcctggagcactgcgaggcgtacggc
aaggaggtcctggccaccatcgagcagcctctggaggagacccacgtccacatcggcaag
aacaccgtcacctacgaggcgcggctgctcaaggcgctgttctacgaggtcatcggctgg
aataaatga
DBGET
integrated database retrieval system
