Pseudoliparis swirei (Mariana hadal snailfish): 130188487
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Entry
130188487 CDS
T09868
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130188487 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130188487 (supt20)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
130188487 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
130188487
NCBI-ProteinID:
XP_056262848
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Position
3:5816186..5833131
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AA seq
888 aa
AA seq
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MTFLSDPKLLNGSVFIRVPVEATDQTRFTRAGPVCSTNVGVAIVTYLFRVTLIFPKQQVL
EYALDRAEYIVESARQRPVKRRISSGGRKSLYQKLYELYIEECEKEPELKNFRRNVNLLE
KLVSQESVSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILV
DLLEKSQVNIFHCGCVIVEVRDYRQSGSTKMPTYQSRHVLLRPTMQTLICDVHAMTSDHH
KWTQDDKLQLESQLILATAEPLCLDPSISVTCTANRLLYNKQKMNTRSMKRCFKRHSRAS
LNRQQELSQLPPQLRLYDYLLRRKERKPAPAADLKISKIGNCVDMWKQSNCQLTVPKEID
VEKYAVVERSLQLDDSQPTTVIWPAEEIVDDYTFECEVGGQPRMTKVSIFQSMGDPLVYG
KIYCAKEPKAEDDNSDLKLIHSPFLIGSKIDADRFLTQYKGVYESDVKCEVKMSHNSGNV
GQGPLSLSKDEGDGISPLVQSPALGKGAKHRPPPIKLPSGSGNSSSGNIYSSQTTSGLLK
CPTPPPAKSQSLNRKHSMELSQVGLLSPASLSPMGSTQRLGTPKPSTPTPTNTPCSTPHP
ADSLCAPLSLTPTPSDPPMLQSQSQSALLAPYAQQQLALSQPLPVMTIPLPAMGTSIATG
TTSPQVMANAAGLNFINVVSSVCSPQSLMGGSNPMLGPGLNLSGILPTGGLMPTMQSAAQ
AGSPFGLNSSAGLRPLNLLQIPTGPLIFNSLQQQQLSQFSPQQSLSATSSPQQQGETGDQ
GSDQSLGNQQTAVINLGVGGFMSSQAAVLSQLSCGLDGSGPLLPSPRLQQQHQPQIQLQF
LQHQMQQQQQMAMGAAAAAPQGGAPRQHTASQPRSKRKRSMPQPLPKS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgacatttctaagtgaccccaaacttttgaacggtagtgtatttatcagggtaccagtt
gaagccaccgaccagacacgattcacaagggctggcccggtttgttctaccaatgtggga
gttgccattgtcacttatctattccgtgtcactcttattttcccaaagcaacaagttttg
gaatatgcattggatcgagccgagtacattgtggaaagtgctcgacaacgaccagtcaaa
agaagaatctcatccggtgggaggaagagtttgtatcagaagctctatgagctgtacata
gaggaatgtgagaaagagccagagttaaagaattttaggagaaatgtgaatttactggaa
aagctggtatctcaggagtccgtctcatgcctggtggtcaacttgtaccctgggaatgaa
ggctactctctaatgctcaggggcaaaaatggatctgattctgagaccatccgtctgcca
tatgaagaaggagaactcttggagtacctagatgcggaggagttgcctcctattctggtg
gatctgttggaaaaatcgcaggtgaacatcttccattgtggctgtgtaatcgtagaggtg
agagactacaggcagtctggtagtaccaagatgcccacctatcagagcagacacgtcctg
ctgcggccaaccatgcagactctgatctgtgatgtccatgcgatgaccagtgaccaccac
aagtggacacaggatgacaaattacaactggagagtcagttgattttggccacggctgaa
cccctgtgcctggacccctccatttctgtcacctgcacagccaatcgcctgctctacaac
aaacagaagatgaacactcgctccatgaaacggtgtttcaagaggcactctcgggcttca
ctaaacaggcagcaggagctttcccagctgccaccgcagctccgactctacgactacctg
ctgaggcggaaggagaggaaacccgctcccgctgcagaccttaagatctcaaagatcgga
aactgtgtcgacatgtggaagcagagcaactgccaacttactgtaccgaaggagatcgat
gtggagaagtatgctgtggttgagcgatcgctgcagttggacgactctcagcccaccact
gtgatctggcctgccgaggaaattgtagatgactacacatttgagtgtgaagtcgggggc
caacccaggatgaccaaggtgtctatcttccagtcgatgggagacccgctggtgtatggg
aagatatactgtgctaaagaaccaaaagccgaagatgacaactctgatctaaagctcata
cattcccccttcctcataggctccaagatcgatgcagatcggtttcttactcagtacaaa
ggagtgtatgagagcgatgtgaagtgtgaggtcaagatgtcccataactcaggcaacgtg
ggacaggggcctctctctctgagcaaagatgagggtgatggtatttctcctctagtccag
tcgcctgctttgggaaaaggggcaaagcatcgaccgcctcccataaaactgccttctgga
tcaggcaacagctcctcaggtaatatatatagttcacaaaccaccagtggtctactcaag
tgtcctacgccccctccagccaaaagccagtctctgaacaggaagcactccatggagctg
agccaggtgggcctgctgtcacctgcctccctctcccccatgggctccacacagagattg
gggactcccaagccatccacccccacacccaccaacacgccgtgctcgaccccgcacccc
gccgactccctctgtgctcctctctcgttgacccccaccccgtcggaccctcccatgctt
cagagccagtcgcagtccgccctcctcgcgccctacgcccagcagcaactggctctaagc
caaccgctgcccgtcatgaccattcccctgcccgccatgggcacgtccatcgccacggga
accacctcgccgcaggtcatggccaacgcggcggggctcaatttcatcaacgtggtcagc
tccgtgtgcagtcctcagagcttgatgggcggctctaaccccatgctggggccaggcctt
aacttaagtggaatccttccaaccggaggactgatgcccaccatgcagtccgcagcacag
gccgggagtccgtttggcctgaacagcagcgctgggttgagaccactgaacctactgcag
atccccactggccctctcatctttaactctctgcagcagcagcagttgtctcagttctcc
ccacagcagagtctgtcggccacttccagtcctcaacagcagggggagacgggcgaccag
gggtcggatcaaagtttaggaaaccagcaaacggcggtcatcaacctgggagtcggaggt
tttatgtcatcacaggcggccgtactgtcccagttgagctgcgggctggacgggtctggg
cccctgctgccttctccaaggcttcagcagcagcaccagccacagatccaattgcaattc
ttgcagcaccaaatgcagcagcagcagcaaatggctatgggagcagcagcagcagctcct
caggggggagcaccacggcaacataccgccagccaaccaagaagtaagaggaagaggagc
atgccacagcccctccccaagtcatga
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