Pseudoliparis swirei (Mariana hadal snailfish): 130188498
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Entry
130188498 CDS
T09868
Symbol
unkl
Name
(RefSeq) putative E3 ubiquitin-protein ligase UNKL isoform X1
KO
K23047
E3 ubiquitin-protein ligase UNKL [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130188498 (unkl)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130188498 (unkl)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130188498 (unkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_11
zf-CCCH_UNK-like_4th
zf_CCCH_5
zf-C3HC4_3
zf-CCCH
Prok-RING_4
zf_CCCH_4
T4_Rnl1_C
BRE1
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
130188498
NCBI-ProteinID:
XP_056262858
LinkDB
All DBs
Position
23:6329634..6344415
Genome browser
AA seq
747 aa
AA seq
DB search
MPSVSKTAANASPQTEKPSHYTYLKEFRTEQCPLFLQHKCTQHRPFTCFHWHFLNQRRRR
PIRRRDGTFNYSPDVYCTKYDETTGICPDGDDCPYLHRTTGDTERKYHLRYYKTGTCIHE
TDARGHCVKNGLHCAFAHGPHDLRPPVYDIREIQAQEALQNGQLGSGEGIPDLQPGVLAS
QAMIEKTLTEDPRWQDTNFVLANYKTDQCTKPPRLCRQGYACPHYHNSRDRRRNPRKFKY
RSTPCPNVKHGDEWGEPSKCDSGDGCPYCHSRTEQQFHPEIYKSTKCNDMRQTGYCPRGP
FCAFAHVERIPSTEETMSSLLTVIQTSSQAQLGSQQYSECAGSEWTSGGSSATSSNGQVG
SMKNKGQVDLKLTDQEKQTQNAVFSAANPLASSFTSSVTSSLASSVGSNSSSPTTLSTMN
AKATPFYPGSNTVESVIGSALDLNFSDIDVASLEKELEEQDDSVGLATGQRLLAGSAPVN
IPGSLARSSSFHSSSSLSTSPLGSLSQSLSQSLLSATLSQRNHSSNVLAKQEHGLLGTLS
SSSQNSLGLNGGASSIWDFVSGSFSPSPSPVFSSLTAAAGSADLARLFRDLDEAKRKIKQ
WEEAWHQVKQACEACQKETRDAKERAKASEAERRLAEQKWEETERRRKELQGDFDVLCRT
PGTPLLRSYRELDKLPLSKLHSIQSRLRNDLDLIDGVIYQLQSKKCVVCQKHDRCVVLQP
CQHYVLCESCAPSKTQCPYCRTKILKW
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggtttcgaaaacggcggccaatgcgtctcctcaaaccgagaaaccttcccac
tatacatacttaaaggagttcaggacagagcagtgcccgttgttcctccagcacaagtgt
acgcagcacagaccgtttacgtgctttcattggcattttctcaaccagcggcggagacga
cccatccgaagaagagacggcacgttcaactacagccccgacgtgtactgcacgaagtac
gacgagacgacaggcatttgccccgatggagacgactgtccttatttacaccggacgacc
ggagacacggagcgcaaataccatctacgctattacaagacgggcacttgcatccacgag
acggatgctcgaggccattgtgtgaagaatggactccactgtgcgttcgctcacgggcca
catgacctccgacctcctgtctacgatatcagagagattcaagcacaagaggcccttcaa
aatggccagttgggatcaggggaaggtattcctgacctgcagcccggtgtgttggccagc
caagctatgattgagaaaactctgacggaagacccccggtggcaagataccaactttgtt
ttagccaactacaaaacggatcagtgcacgaagcccccgagactatgcagacagggctac
gcctgcccccactaccacaacagtagagatcgaagacggaatccaagaaagttcaaatat
cggtcgactccgtgcccgaatgtgaagcacggggacgaatggggcgaaccctccaagtgt
gacagtggagacggctgcccgtactgtcactctcgcaccgagcagcagtttcacccagag
atctacaaatctaccaaatgcaatgatatgcgacaaactggatactgccccaggggaccg
ttttgtgcttttgcacatgtagaaagaattccctctacagaggagaccatgagctcactg
ctcacggtgatccagaccagctcacaggcccagctgggctctcagcagtactctgagtgc
gccggcagtgagtggaccagcggaggcagctctgcaaccagtagcaacggacaagtagga
agtatgaagaacaagggacaggtggatctcaaattaacggaccaagaaaaacagacacaa
aacgcggtgttctctgcggcgaacccgttggcgtcgagcttcacctccagcgtcacgtcc
agcttggcctcgagcgtcggctccaacagctcttcgcccaccaccttatccaccatgaat
gcaaaggccacgcctttctacccggggagcaacacggtggagtccgtcatcggatcggcg
ttggacctcaacttcagtgacattgacgtggcgtctctggagaaggagctggaggagcaa
gacgacagcgtcgggctggcgacaggtcaaaggttgctcgccggctcggccccggtcaac
attcccggctccctggcgcggtcgtcgtcgttccactcgtcgtcgtcgctctccacctcg
ccgctcggctccctctcccagtcgctgtcgcagtcgctgctgtcggcgacgctgtcgcag
cggaatcactcatcaaacgtgctggccaagcaggagcacggcctcctggggaccctcagc
tcctcttcccagaattcattgggcttgaacggcggggcgagcagcatttgggactttgtg
agcggcagcttttcccccagtccgtctccagtgttcagcagcctcaccgcggccgccggc
agcgccgacctggctcgcctcttcagagacctggacgaggccaagaggaagatcaagcag
tgggaggaggcctggcatcaggtcaagcaggcctgcgaagcgtgccagaaagagacgcgc
gacgcgaaggagcgagcgaaggcgtcggaggcggagcgtcggctggcggagcagaagtgg
gaggaaacggagcgcaggcggaaagagctccaaggggactttgacgtgctttgtcgcacc
ccggggactcctctcctccgtagctatagagagctggacaagctgcccttgtccaagctc
cactccatccagagtcggctgcgtaatgaccttgaccttatagacggggtaatttatcag
cttcagtcaaagaaatgtgtagtttgccaaaagcatgaccgctgcgtcgtgctgcagccg
tgccagcactacgtgctgtgtgagagctgcgcgcctagtaaaacccaatgtccctattgt
agaacaaaaatactcaagtggtga
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integrated database retrieval system
