KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130188513
Entry
130188513         CDS       T09868                                 
Symbol
elob
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130188513 (elob)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130188513 (elob)
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130188513 (elob)
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     130188513 (elob)
   Cul5 complex
     130188513 (elob)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130188513 (elob)
SSDB
Motif
Pfam: ubiquitin TPR_HPS5 Mu_AP3
Other DBs
NCBI-GeneID: 130188513
NCBI-ProteinID: XP_056262877
LinkDB
Position
23:6959479..6966609
AA seq 178 aa
MPILRCRVSHRPKALIAPSAGLLYYLTSARRRQVQVQQRFSEVNVRESSVSHFCPSISPQ
DVFLMIRRHKTTIFTDAKESTTVYELKRIVEGVLKRPPEDQKLYKDDVMLNDGQTLGNCG
FTNQTARPQTPATVGLSFRLSDDSYEQLRVESFSTPPELPDVMKPQDSGSTANEQSVQ
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcccatcctgcggtgtcgcgtttcacaccgccccaaggctctgatagcgccgtctgcc
ggacttctctactacctcaccagcgcccgcagaagacaagtacaagttcaacaacgtttt
tctgaagtgaatgttcgtgagtcgtcggtgtctcatttctgtccctcgatctctcctcag
gacgtgtttctaatgatccgacgtcacaagacgaccatcttcaccgatgccaaagagtcg
accacagtctatgaactgaagcgcatcgtggaaggcgttttaaagaggccccctgaagat
cagaaactttacaaggatgacgtgatgcttaatgatgggcaaactcttggaaattgtggc
tttacgaatcaaacggctcgacctcagaccccagccacggtggggttatctttccgtctg
agtgatgattcatatgagcagctgagggtcgagtctttctccactccaccagagctccct
gacgtcatgaagccccaggactcgggcagcacagccaacgagcagtctgtacagtga

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