Pseudoliparis swirei (Mariana hadal snailfish): 130188515
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Entry
130188515 CDS
T09868
Symbol
mybpc2a
Name
(RefSeq) myosin binding protein Ca
KO
K12558
myosin-binding protein C, fast-type
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130188515 (mybpc2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130188515 (mybpc2a)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130188515 (mybpc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
FN3_DSCAM-DSCAML_C
V-set
Ig_CYK3_C
Motif
Other DBs
NCBI-GeneID:
130188515
NCBI-ProteinID:
XP_056262879
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All DBs
Position
23:complement(7317493..>7345065)
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AA seq
1110 aa
AA seq
DB search
FICSPPSTENVPGEDRQLSETSSIFVETPESVTITKGKDVTFVTKIYSTNLLRKPNMKWL
KGKWLDLSSKAGKHLEFKEVYDRNTKIYTYEMTIIKVVDGDAGGYRCEVTIKDKVDTSSF
EVTVQGTEEEKQDNNILDSFKRSGDGGEDAGDLDFSALLKKRERKQKVEEVEVDVWEILK
DAKPCDYEKIAFEYGITDLRGLLKRLKKMKKVEPKKSEAFLKKLEGAYSVDKGKKIHLEV
ELANPNTPIKWFKNGQEIKPSAKYVFESVGNKRTLTINKCNLSDDAAYECVVGEEKCFTE
VFLKELPVTITKLLDDVHSVAGEKVEFEVEVSEEGANVKWMKDGVELNKETAGSKYRFKK
DGKRHILIINEATKEDVGVYQALTNGGESKAELEVEEKELEILQSIADLSVKAAEQAMFK
CEVSDEKVTGKWFKDGVEVQPNKRMKITHIGRIHKLMIDEVMPSDAGDYTFVPVGYALSL
SAKLNFLEIKIEYVPREDPPKIHMDASGSDGTNTITVVAGNKLRLDVEITGEPAPTVCWM
RGDTVVPEAEGRVRVESTTTLSTFVIEGAERGDEGPYSITVTNPVGADKVELFIKIVDLP
NPPENVKCISVGEDFGTITWDPPAFTGGVPIKGYLMERKKVGSSRWTKLNFDVFESTTYE
AKKMIEGVLYEMRVFAVNGIGISQPSGNSMPFMPIAPTSEPTRLTVEDVTDTTCALKWRP
PEKIGAGGIDGYIIEYCVEGSDQWVEANKEPVEKNQTRVKGLPTGEKILFRVVAINIAGR
SPPATLSQAVTIKEIVENPKIRMPRNLRTKLIKLVGDKVNLVIPYQGKPRPVVTWSKDGV
LLEDRSVGTRTSDVDTILFIRSVERAHSGKYTLSVQIENMSVSADVHIQVIEKPGPPTAV
QVVEVWSCNAALQWEPPKDDGNSEIIGYTIQKADMKTKDWFTVFEHNRRPSCTVPDLVMG
NEYLFQVFSENICGLSVEAGISGNTAIVGKTGLSHNRPPFKEAEVTHSPKFTAPLVDRSV
VAGYSTAISCSVRGNPKPKIIWMKNSMIIGEDPRFLSRNNQGVLTLNIRKPSTFDGGRYC
CRAINDLGQDEVECRLVVRAVREKGVEAKE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
ttcatctgttcaccaccctccacagagaatgtgccgggggaggatcgtcagctatcggag
acgagcagcattttcgtggagacgccggagagtgtgacgataacaaaaggaaaggacgtt
acatttgtgactaaaatttactccacgaacctgttgaggaagccgaacatgaagtggctg
aaggggaagtggctcgacctgagcagcaaagctgggaagcacctggagttcaaagaggtc
tacgacaggaacaccaagatctacacttacgagatgaccatcatcaaagtggtggacgga
gacgccggtggctaccgctgcgaggtcaccatcaaagacaaggttgacacctcctcattc
gaagtcaccgtgcagggtacagaagaagagaagcaggacaacaacatcttggactcgttt
aagcgatctggagatggaggggaagatgctggtgatctagacttcagtgccctgctcaag
aaacgggagaggaagcaaaaggtagaagaagtggaggtggacgtgtgggaaatcctgaag
gacgccaagccctgcgactatgagaagatcgcctttgagtacggcatcacggacctgagg
ggcttgctcaagaggctgaagaagatgaagaaggtggagcccaagaagagtgaagctttc
ctgaagaagctggaaggcgcctactctgtggacaagggcaagaagatccacctcgaggtg
gagctggctaaccccaacactccaatcaagtggttcaaaaacggacaggaaatcaaaccg
tcggccaagtatgtgtttgagagcgtgggcaacaagcggacgctcactatcaacaagtgc
aacctgtccgatgacgcagcgtacgagtgcgtggtcggggaggagaagtgcttcacggag
gtctttctcaaagagctgccggtcaccatcaccaagctgctggatgacgttcactccgtg
gccggagaaaaggtggagttcgaggtggaggtgtccgaggaaggagccaacgtcaaatgg
atgaaggatggagttgagctaaacaaggaaacagcaggttcaaagtaccggtttaaaaag
gacgggaagagacacattttgatcatcaatgaagctacgaaggaggacgtcggcgtgtat
caggcgctcaccaacggcggcgagtcgaaggcagagctggaagtcgaagaaaaggagctg
gagattcttcagagcatcgccgacctgagcgtgaaggctgccgagcaggccatgttcaag
tgtgaagtgtccgatgaaaaggtgacggggaaatggttcaaggacggcgtggaagtccag
cccaacaaacgcatgaagatcacacacatcggaaggatccacaagctgatgattgatgaa
gtgatgccttcggacgctggagattatacgttcgtccccgttggatacgccctctctctc
tctgccaaactcaacttcctggaaatcaagattgagtatgttcccagagaagaccctccc
aaaatacacatggacgccagcggcagcgacggcacgaacaccatcaccgtggtggccgga
aacaaacttcgcctcgacgtggagatcaccggcgagccggcgcccaccgtgtgctggatg
agaggagacacggtggtgcccgaggccgaggggagggtccgcgtggagtcaacgacgacc
ctgagcacctttgtgattgagggggcggagagaggcgacgagggcccctactccatcacc
gtcactaaccccgtcggagcggacaaggttgaactcttcatcaagattgtggatctgccc
aaccctcctgagaatgtcaaatgcatatcagttggcgaggactttggcacgatcacatgg
gaccctcctgcattcaccggcggagttcccattaaagggtacctgatggagaggaagaag
gtcggctcatccagatggaccaagctgaactttgatgtcttcgagtccaccacatacgag
gctaagaagatgatcgaaggcgtcctttacgagatgagagtgtttgcagtcaacggcatc
ggcatctctcagcccagcggaaactcaatgcccttcatgcccattgcccccaccagcgag
cccactcgtctcacggtggaggatgtgaccgacactacctgtgctctcaagtggcgtcct
ccagagaagatcggagctggcggcatcgacggttacatcattgagtactgcgtagaagga
agtgatcagtgggtggaagccaacaaagaaccagttgagaagaaccagaccagggtgaag
ggtctcccaacgggggagaagatactgttcagagtggtggcgatcaacatcgctggacgc
agcccccccgctactctcagccaggccgtcaccatcaaggagatcgtggaaaatccaaag
atccgcatgcctcgcaatctgaggaccaaactcatcaagcttgtgggcgacaaggtgaac
ttggtcatcccctatcagggtaagcctcgccctgtggtgacctggtccaaagatggcgtt
ctcctggaggacagaagcgtgggaacccgtaccagtgacgtggacaccatcctcttcatc
cgctcggtcgagagagcccactccgggaaatacacgctgtccgttcagatcgagaacatg
tcggtcagcgctgacgtgcacatccaggtcatagagaagcccggtcctcccaccgccgtg
caggtcgtggaggtgtggagttgcaacgcggcgctgcagtgggagccgcccaaggacgac
ggcaacagtgagattatcggctacactattcagaaggccgacatgaagactaaggattgg
ttcacggtcttcgagcacaaccgcaggcccagctgcactgtccccgacctggtcatgggg
aacgagtatttatttcaagtgttcagcgaaaacatctgcggcctcagcgtcgaggccggc
atcagcgggaacaccgccatcgtgggcaaaacaggtttgtcccataaccgtccacctttc
aaagaggcggaggtgacccattcccccaagttcacggcgcccctggtggacagaagtgtg
gtggcaggttattctacagccatcagctgttccgtccgtggcaacccaaagccaaagatc
atttggatgaagaacagcatgatcatcggtgaagacccccggtttctgagtcggaacaac
cagggcgtgttgactctgaacatccgcaagccgagcacgtttgacgggggcagatactgc
tgcagggccatcaatgacctcgggcaggacgaggtggagtgcaggctcgtggttcgagct
gtacgagagaaaggagtggaggcgaaggagtga
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