Pseudoliparis swirei (Mariana hadal snailfish): 130188576
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Entry
130188576 CDS
T09868
Name
(RefSeq) excitatory amino acid transporter 3-like
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130188576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130188576
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130188576
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GFIT
Motif
Pfam:
SDF
Claudin_2
Motif
Other DBs
NCBI-GeneID:
130188576
NCBI-ProteinID:
XP_056262944
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Position
23:14338946..14363884
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AA seq
477 aa
AA seq
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MSVLGTALGFCMKTFRPYSDESQYYLRLPGELLMGSLQTVSLPLMVTSVILGIINLRAPM
KIALRAAFIFVLTTVVAVLIGLMLVLVIKPGAAYTEDEDDQQVEVEFAFMDSLIDLVRNV
LPSNVMRASFKTYKTTRLRFANHSLNSNSSLKTNDSVVQLEGHYVDGTNTLGLIVSALLT
GVTLKSMGKVARFWPFGLISMIASNIFAVYDLETMHKLREFVLVVIVGLLIHGCVALPAL
YCLLVRQNLWHCIKGIFPALLTALMISSSSATVPVTLRCCVERNDVDRRIARFTLPIATT
VNMDGSALYEVVAVVFLAQLSGIELGLSRVIEISVLAGISSLSAAGIPATGAVTTLFVLE
VAGLPTGNASILFAVEWILDCLNTVVNVWSDCICVEIVNALSQRELEDIEQEEQTPSDDV
EGRVTPGSAGQQWAQQQDQGLTHRVLGWLPAGGGDAAPGQRALHLLLELPNAAGKQR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcctggggaccgcgttaggcttctgcatgaagacgttccgcccgtactcagac
gagagccaatactacctccgcctgccaggagagctgctgatggggtcgcttcagactgtc
tctctgcctcttatggtgacgagtgtcattttaggaataataaacctgagagcgcccatg
aagatcgctctgcgtgcggccttcatctttgtcctcaccacagttgtcgctgtgctgata
gggttgatgctggtcctggtgatcaagcctggggcggcttacaccgaggacgaagacgat
cagcaggtggaggtagagttcgccttcatggactccttgattgatctcgtgaggaacgtg
ctcccaagtaacgtgatgcgggcttccttcaaaacgtacaagactacgaggctgcggttc
gcaaatcactcgttgaactctaactctagcctgaagacgaatgactctgttgtgcaactg
gagggtcactatgtggacggcaccaacacgctgggcctgatcgtgtctgcccttttgact
ggagtgaccctgaagagcatggggaaagtggccaggttctggccatttggattgatatcc
atgattgccagtaatatctttgcggtgtatgacctggaaaccatgcataaactcagagag
tttgtgttggtggttattgtcggactcctcatccacgggtgcgtcgctctcccggccttg
tactgcctactggtgagacagaacctgtggcattgcatcaagggcattttccctgcctta
ttgactgctctgatgatctcctccagctcggccacggtgcccgtcactctgcgatgctgc
gtggagagaaacgacgtggaccggcgaatcgcccgcttcacgctgcccatcgcgaccacc
gtcaacatggacgggtcggccctttacgaggtggtcgccgtcgtcttcctcgcccagctc
agcggcatcgaactgggcttgagcagggtcattgaaatcagcgtgttggcgggcatctcc
agcctcagcgcagcagggatcccggcgacgggagccgtgaccaccctcttcgttctggag
gtggcgggcttacccacggggaacgcctccatcttgttcgccgtggaatggatcctagac
tgcctcaacacggtcgttaatgtctggtcggactgcatctgcgtggaaattgtcaacgcc
ctgtcccaaagggaactggaggatatagagcaagaagagcagacgccgagtgatgacgtc
gagggacgcgtcacgccggggtcagcaggtcagcagtgggcccagcagcaggaccagggt
ctcacgcatcgtgtgttgggttggcttccagctggagggggagacgctgctcctgggcaa
cgagctctccacctcctgctggagcttcccaacgcagctggaaagcagcggtga
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