Pseudoliparis swirei (Mariana hadal snailfish): 130188600
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Entry
130188600 CDS
T09868
Symbol
ccdc47
Name
(RefSeq) PAT complex subunit CCDC47
KO
K24962
PAT complex subunit CCDC47
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pswi03110
]
130188600 (ccdc47)
04131 Membrane trafficking [BR:
pswi04131
]
130188600 (ccdc47)
Chaperones and folding catalysts [BR:
pswi03110
]
Other chaperones and cochaperones
Others
130188600 (ccdc47)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
130188600 (ccdc47)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
130188600
NCBI-ProteinID:
XP_056262975
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All DBs
Position
23:6855889..6861432
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AA seq
492 aa
AA seq
DB search
MGSPRLLLIPALLLLLALPYSKGRYNEEFDDGEDLADFDDNDFAEFEDMNDDSAAEAETA
PPSRASLASQPEEDEDEDEATVELEDGLDGDGFEDSETQDQDMYSKYDQEEFEGIGDMEK
TGHSMKDPLIIHTVPAHLQNSWESYYMEILMVTGLLAYIMNYLIGKNKNSRLAQAWFDSH
RELLESNFSLVGDDGTSKEGVSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLL
NVLARMMRPVCDQVQIKVTLNEDDMDTFVFAVGTKKAMAKLQKEMQDMSEFCGDKPKSGA
KFGLPDSLSILSEMGEVTDGVMDNKMVHYITNNAEKIESIQFSDQFSGPKVTQEEGQPLK
LPETKKTLLFTFNVPGMGNTSPKDMDSLLPLMNMVIYSIDKVKKLRLNREGKMKADRNRA
RVEENFLKQTHAQRQEAAQTRREDKKRAEKEKIMNEEDPERQRRLEEASQRRDQKKIEKK
QMKMKQIKVKAM
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggggagtccgcgtctcctcttaattccagcactgctgctcctcctggcccttccctac
tccaagggacgctacaacgaagaatttgatgatggcgaggaccttgcagactttgatgac
aatgacttcgctgagttcgaggacatgaacgacgattcagcagctgaggcagaaactgcc
cctccgtctcgcgcctcactggcctcgcagcccgaagaggatgaggatgaagatgaagcc
accgtggagctggaggatggcctggatggggatggctttgaggactccgagactcaggat
caagacatgtacagtaaatacgaccaggaggagtttgagggaattggagacatggagaag
acgggccactccatgaaggaccccctcataatccacacggttcctgcacatctgcagaac
agctgggagagttactacatggagatcttgatggtcaccggactgttggcctacatcatg
aactacctcattggcaagaacaagaacagtcgcctcgctcaggcctggttcgactcacac
agggagcttctagagagcaacttttcactagtgggtgatgacggcaccagtaaagaagga
gtgagcactgggaagctgaatcaggaaaatgagcacatctacaacctgtggtgctccgga
cgtgtgtgctgtgaaggcatgctgatccaactcaagttcctgaagaggcaggacctgctc
aacgttctggccaggatgatgaggcccgtctgtgatcaagtgcaaatcaaagtgactcta
aatgaagacgacatggacacgtttgtgtttgctgttggcaccaagaaggcgatggccaag
ctccagaaggagatgcaggacatgagtgagttctgcggtgacaagccaaagtccggagcc
aaatttgggctccctgactctctgtctattctaagtgagatgggcgaagtcacagacggg
gtgatggacaacaagatggtgcattatatcaccaataatgctgaaaagatcgagtccatt
caattctcggaccaattttctggtccaaaagttacgcaagaggagggtcagcccttaaag
ctgcccgagaccaagaagacgctgctgtttacctttaatgtgcctggtatgggcaacact
tctcccaaagacatggattctctgctccccctcatgaacatggtgatctacagcatcgat
aaagtcaagaaactccgtctcaaccgagagggcaaaatgaaagctgacaggaaccgggcc
cgtgtggaggagaacttcctgaagcagactcacgctcagcggcaggaggcggcacagacg
cgccgggaggacaagaagagagccgagaaggagaaaatcatgaacgaggaggaccctgag
agacagcgtcgcctggaggaagcgtcccagcgacgtgaccagaagaagatcgagaagaag
cagatgaagatgaagcagatcaaagtgaaagcgatgtga
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