Pseudoliparis swirei (Mariana hadal snailfish): 130188789
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Entry
130188789 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
U-box
zf-RING_5
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130188789
NCBI-ProteinID:
XP_056263256
LinkDB
All DBs
Position
23:4635258..4650208
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AA seq
1561 aa
AA seq
DB search
MSHIHYKFSSKLDYDTVVFDRLYVSLKDLKSQIMGREKLRVGDCDLQITNAQSKEEYKDD
DCSIPKGSSVIVRRIPVIGGKSSSSKTRHIERSDVQTHQAFGAYKAMDDQSSSRAVPFFA
QIANLADVDGSEEDKIKAMMTQSSYGTLNYTKKFGTVLPANYTCYRCGNTGHHIRNCPVN
VQDKNFQAPTRIKKSTGIPRSFMVEVDDPNTKGAMLTSCGRYAVPTIDIAAYAIGKKERP
PFLPQEQPETEEEEDPVSEELLCLLCHDLLSDAVVIPCCGNSYCDDCIRTALLDSEDHVC
PTCSQPDVSPDNLIANKFLRQAVDYFKKEQGVSKSQKKGCGPSQSQNPTLTPSPVPTPPP
VGEPSLPRKPPPSTSSQLDPLLHHSQAAHTPPPVAQVCVAPPTATGPASSAPTASLQPVQ
SHLEEPDKEAEEKTSDDSAAAATPSVPVSPKDPTDAPSQLIPVAKLPPLMEPPQTVGLNV
EPPPSATGPAPKPSAPPTSWESSSSSSLCPPGGWNESTAQQPPPSVSSYPSTPPPPLFPS
PHFHTFLAAQQPLPGYPPGYPPTPPLWALPNLQGSPIPSLCPLASIPALIPSEWFQHQRK
KERSPHGGSSHRRSSSRSEKFKSSRSSSRSRSRSHGRSRPHSPYSRRGDLHSRSTSSRSY
SYGYKRSPTPSSSSSPRVGYRSRPKAAAAADRGKSVSRSRHHSKKSSSSSYGTRRQGGEH
HQREARPSGGSLPGQLHAQRANQSGGQELDRERYLQWNRDYKEWCDKYFSSYVGHFHQLP
VPLLNIPPPPQWGGGGEGGGDAPDSRGRAARPERRSPRSSSDSRSLPSRSSRDSRSTPSR
SSSDSRSSPSRSSDGSRSSRSSGSTPSKDGAPRAERAGRRSVPLAKGGKVAEPREGREDE
KKATGEGLENLATVKHEQEEKNGGEEESSSPDAADSTDACRKDERRRSTGPDAFKDGPPA
RDEAAAGDAVESAQPLLKPDKRSDKDDERKSRAHRTSDKETGRRRGRRSDSRPEEERRHK
EKKSRERDAPDADSRSERSRKRKGEDVKRSSLKVENSKSLKTNTAEDPKPRRSESPNPFD
RKKPKMEKKKERKTWPLTERDIWEGGIPVKPQKKININININLDGNRKEEGTEKEQLFYI
EKTKMAANGETENDDEDVDGASEEKITPDEGDARQKWEKATFRDDEGEMLEKKDLGEKKE
DFDFWHSAPRGEEETTKESEKQGDERDGMEASKGEELSDERGVEAGPAMAESTCEENRDD
LPGESKEEEEEEEEDTLGSQRSRNQNHRDGPNSSVDHGSSGGPRQQSPMVKALEEEHAEV
VKVPRTKREEEERREGVAKAQADALASSLPSETRTNRDWQKEEKRERSVERERGREREKS
PHRRVAPSSGKDRNDSAAYSDRERRRDRVRERPRERESKRSREGEKGRDGEQQRNPPSSS
HSKSHDTERRDAKSSPPLSRKCSGGRRRESRALELPERSTHTSKCQHEDHRQDPPGCSRP
PGARLSPPPPSQSHERDPDFTPNKTVEKEEWKLRPGREEGTNGETVAVRAGGGPWEEEEG
E
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatattcactacaaattctcctccaaactcgactacgacacggtggttttcgac
cgcctgtacgtcagcctgaaggacctgaagagccagatcatgggcagggagaagctgcga
gtcggggactgcgacctgcagatcaccaacgcgcagagcaaagaagagtacaaagatgac
gactgttcgatacccaaaggctcctccgtcatcgtcaggaggatcccggtcatcggcggg
aagtccagctcgagcaagacgcgccacatcgagcgatccgatgtccagactcaccaagcc
tttggagcctacaaagccatggacgaccagagctcctccagagccgtgccgtttttcgct
cagattgctaacctggccgatgtggatgggtctgaggaggataagatcaaagcgatgatg
actcagtccagctacggcaccttgaattacaccaagaagtttgggactgtgctgcctgcc
aactacacctgttaccgctgtggtaacaccggacaccacatcaggaactgtcccgtcaac
gtgcaggataaaaacttccaagcccccacgagaattaagaagagcacgggtatcccccgg
tccttcatggtggaggtggacgaccccaacaccaagggagccatgctgaccagctgcggg
cgctacgccgttcccaccatcgacatcgcggcgtacgccatcggcaagaaggagcggccg
ccgttcctcccccaggagcagccggagacggaggaggaggaggaccctgtatcggaggag
ctcctctgtctgctctgtcacgacctgctgagcgacgccgtggtcataccctgctgcggg
aacagctactgtgacgactgtattcgcaccgccctcctggattcagaggaccacgtctgc
cccacctgcagccaaccggacgtctcccccgacaacctgatagccaataagttccttcga
caggctgtggactattttaagaaggagcaaggcgtctctaaaagtcagaagaaagggtgc
ggcccctcccaatcccaaaaccccaccctgacgccgagccccgtcccgaccccgcccccg
gtcggcgagcccagcctgccgcggaagcctcccccgtcgaccagcagccagctggaccct
ctcctgcaccactcacaggctgcacacacaccaccgccagtggctcaggtgtgtgtggct
ccgcccacagcaacaggccccgcctcctctgctcccaccgcttccctgcagcctgtgcaa
agccacctggaggaacccgacaaagaggctgaagaaaagaccagcgatgactcagcggct
gccgccaccccgtctgtaccggtttcacccaaagaccccactgacgccccatcacagctg
atacccgtagcgaagcttcctcctctgatggagccgccgcagacggtcgggctgaatgtc
gagccgccaccttcagccacaggtccggccccaaaaccctcggcgccgccaacgtcctgg
gaaagctcctcctcctcctcactctgtccccctggaggctggaatgaatccaccgcccag
cagcctcctccctctgtttcctcatatccctcaactcctcctcctcctctctttccctcc
cctcattttcacacattcctcgccgctcagcagcctctccccggttaccccccggggtac
ccgccgactccccccctctgggcactcccaaacctccaggggtcccctatcccgtccctc
tgccccttggcctccatccccgccctcatccccagtgagtggttccagcatcagagaaag
aaggaaaggtcacctcacggaggatcttcccacagacgctcctcctctcgctctgagaag
ttcaagtcttctcgctcctcgagcaggtcccggtcccggtcccacggcagatccaggcct
cactcgccttactcccgccgcggagacctccacagccgctccacttcctcccgctcctac
agctacggctacaaacgttcccccacgccgtcctcgtcctcttcgccccgagtcggctac
cgctccaggcccaaggcggcggcggcggcggatcgcggcaagagcgtcagccgcagtcgg
caccacagcaagaaatcgtcttcgagcagctacggcaccaggaggcagggaggagaacat
caccagagggaggcgagaccctcggggggcagtttacccggacagctgcacgctcagcgg
gccaatcagagcggcggccaggagctggaccgagagcgctacctgcagtggaaccgggac
tacaaagagtggtgcgataaatatttcagcagctacgtcggccacttccaccagctgcct
gtccccctcctcaatatcccccctcctccgcagtggggggggggcggcgaaggaggcggg
gacgccccggactctcgcgggcgcgccgctcggccggaacgccgctcgcctcggtcgtcc
agcgacagccgctcccttccctctcggtcttcgagggacagccgctccacgccgtctcgg
tcgtccagcgacagccgctcctctccgtctcgctcgtccgacggcagccggtcgtctcgg
tcgtccggctccacgccgtccaaagacggagctccgcgcgccgagagggccggccgccgc
tcggtcccgctcgcaaagggcggtaaggtcgcggaaccgcgagagggtcgcgaggacgag
aagaaggcaaccggcgagggtttggagaacctcgccaccgtgaaacacgagcaggaggag
aagaacggaggagaagaggagtcgtcctcccctgatgccgcagactccacggacgcctgc
aggaaggacgagaggagacgcagcaccgggccagatgccttcaaggacggccctccagcg
cgggacgaagcagctgccggcgacgccgtggagtcggcgcaaccgctcctcaaacccgac
aaacgttcggataaagacgacgagagaaaaagccgagcgcacaggacttcggacaaggag
acgggacggagaagaggccggcgctcggactccaggccggaggaggagaggcggcacaag
gaaaagaaaagcagagagcgagacgcgccggatgccgactcgagatcagagaggagcagg
aaaagaaaaggagaggacgtcaagagaagctctctgaaggttgaaaacagcaaaagcctg
aaaactaacacggcggaggaccccaaaccccgcaggagcgaatccccgaatccattcgat
agaaagaagcccaaaatggagaagaaaaaagagagaaaaacatggccgctgacggagagg
gacatctgggagggagggataccggtgaaaccacagaagaagatcaacatcaacatcaac
atcaacctggatggaaacaggaaggaagagggaactgaaaaagagcagctgttttatata
gagaaaacaaagatggctgctaatggagagacggagaatgacgatgaagacgtggacgga
gcgtctgaagagaagatcacaccagatgaaggagatgcaagacagaaatgggagaaggcg
actttcagagatgatgagggagaaatgttggagaaaaaagacctcggagagaagaaggag
gactttgacttctggcatagcgcccccagaggagaagaggagacgacgaaggagagtgaa
aagcagggggatgaaagagacgggatggaggccagtaaaggagaagagctgagcgacgag
aggggagtggaggcggggccggcgatggcagaaagcacctgcgaggagaacagagacgac
ctgccgggggagtcaaaggaggaagaggaggaggaagaggaggacacgctggggtcccag
aggagcagaaaccagaaccaccgagacggacccaactcctcggtggaccacggcagctcc
gggggtccgcggcagcagagcccgatggtgaaagctctggaggaggaacacgctgaggtc
gtaaaggtccctcgcaccaagcgggaggaagaagagcgccgtgagggcgtggccaaagct
caagcggacgctcttgcatcgtctttgccttcagagacgagaaccaacagggactggcag
aaggaagaaaagcgagagaggtcagtggaaagggagagaggaagggagagagagaaaagc
ccccaccgtcgtgtggctccctctagtggcaaggacagaaatgacagcgctgcgtattca
gacagggagagacggagggatagagtgagggagaggccgagggagagagagagcaaaaga
tcaagggagggagagaaagggagagacggggagcaacagaggaaccccccgtcctcctct
cattccaagtcacacgacacggagaggagagacgccaagagttcacctccactcagcagg
aaatgctccggtggaagaagacgggaaagcagagccctcgagctgccggagcgaagcaca
cacacatccaagtgtcagcacgaagaccaccggcaggatccaccggggtgctccagaccg
ccaggggcccgcctctccccccctcccccctctcagagtcacgagagagacccagacttc
acgccgaacaaaacggttgaaaaggaagagtggaagctgaggccgggcagagaagaaggc
accaacggggagacggtggccgtgagagcaggaggtggtccatgggaggaggaagagggg
gagtaa
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