Pseudoliparis swirei (Mariana hadal snailfish): 130188807
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Entry
130188807 CDS
T09868
Name
(RefSeq) zinc finger CCCH domain-containing protein 7B-like isoform X1
KO
K24945
zinc finger CCCH domain-containing protein 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130188807
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Zinc finger domain-containing proteins
Other zinc finger domain-containing proteins
130188807
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
TPR_1
zf-C2H2_jaz
TPR_2
zf-CCCH_4
ANAPC3
TPR_12
zf_CCCH_4
Zn_finger_prot
TPR_16
zf-CCCH_DUS3L
DUF3024
Motif
Other DBs
NCBI-GeneID:
130188807
NCBI-ProteinID:
XP_056263288
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All DBs
Position
23:17854607..17869885
Genome browser
AA seq
1039 aa
AA seq
DB search
MDPARQKRKEEIRNSLTFIQSSLAYPEPEGYQDFLTRLVCNLLDEGSASFGDRDWAQAVR
EFSEGLNVYHYAAAEEIQIPEALLESLHVHRAATYQSMGDYERGVADCDIALKVCKESRE
ALFRKALCLRDLGKFKEAYNCTTDCLLVTQLDEQVNALAQELAVHLGLKNRKPYVGMKEG
GLITRAKVANVTNGMKTEAIKVSGIHVGNGLNPLSGLAPVSFPSMPQSSIRSPAPSCRQP
AVLTVPDIVDTLEDFELMGDDLDILLDGFPTEAETPAHETFSIARRTSTCDRAVPSALPA
PTPQLPPAFFSSAVSQLNSLDSFSGGGTTTGTLNALDDLWTAGIGGGAGATNLALTSESL
DGLDSLDDFLDTTQTQANADVDAGGKSLDDLLDELDPLEAVSHPGGQGGDGPQTGVLDSL
DALDSFPSVEAVAAALPAVSFGATSLDTLSDFSATGIAGFQTAAAPVMRPPKKIYKETNI
PALVAASNPLSSTHQFLQACAACFPRKGRGIYTFVHKPDLEHSCQRDILLCRREAGCPSE
WTRVRQIPNWSSFSGPFVLCKELLKSGDLGLCKFGENCTFAYNQLEIDVWTAERKGTLDR
NLLFDTSGLKLDPVNSIIRLLREDKGTFMFLCQECYDGKPRIISKRCRGDHAVCSNLDAR
HTFDANKCLAFVVQTLSVNYRKVRPLSILCHLDLCRQAIRYGCQREDGCNFAHSVIELKT
WRVQRDTGISPEEIVKVSTKYNDNQEQNKHNGNRQPSSGGDGSKPRGGGKSLNMKMKFSC
AQCLRDGLIREPDKALKHCTAKARHTWTKERWVLLVMSLERRKWVQVRPLPHAKNFPVHY
DICTQVLKRGKCNYSGNCTFAHSQEEREMWTYMKNNELREMQQIYDMWLSLTAHDRQEDG
AMLTQPVPGERCIIMPTDYAEPMTGFHCRLCGKHSNGERQWQQHISTEKHKDRVFSCEGE
DEALTWSYRFPGPCFEICPKSDGGCPDGVSCDYAHSAEELREWTERRDFLRRKLAGARAD
MLIMPDEHDFGKFNFLLQD
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgccagacagaaacgcaaggaggagataaggaactcgctgacatttatacag
tcttccctggcttatccagagcccgagggctaccaggacttccttacccggttagtgtgc
aacctgctcgatgagggcagcgcctctttcggagaccgtgactgggcgcaggcggtgcga
gagttcagcgagggcttgaatgtctaccactacgctgcagcagaggagatccagatccca
gaagcgttgctggagagcttgcacgtccaccgggcggccacctaccaaagcatgggggat
tacgagcgaggcgtggcggactgcgacatcgctctgaaagtgtgtaaggaaagccgcgag
gcgctattcaggaaggcactctgtttgagggacctcgggaagttcaaggaggcctacaac
tgcaccacagactgcctgctggttacccaactggacgaacaggtgaacgcgctcgcacag
gagctcgccgtccacctgggactgaaaaatcggaaaccatatgtcggcatgaaggaagga
ggactcatcacgagagctaaagtcgctaacgtgactaatggaatgaagactgaagccatc
aaggtgtctggtattcatgtcggaaatgggttgaatcctctgagtggcctcgcaccagtc
agttttcctagcatgcctcagtcctccattcgctccccagctcccagctgccgccaaccg
gctgtgttgacggtgcccgacatcgtggacacgctggaggacttcgagctgatgggagac
gatttggacatcctgctcgacggcttcccgactgaggcggagacccccgcccatgaaaca
ttctcaatcgcacgccggacttccacctgcgaccgcgcggtcccctctgcgctgcccgcc
ccgacaccccagctgcccccggccttcttcagctcggccgtcagccaactcaactccctg
gactccttctcgggcggcggcaccacgaccggcacgctgaacgctctggacgacctctgg
accgccggcatcggtggcggcgcgggtgcgactaacttggcgctgacctccgagtcgctg
gacggcctcgactcgctggacgacttcttggatacgactcaaacgcaggccaacgcagac
gttgacgccggggggaagtcccttgatgatttgctggatgaactcgatcctctggaggcc
gtctcccatccaggcggtcagggtggagacggccctcaaaccggcgtgctcgactccctt
gatgccctggactcgttcccctcggtggaggctgtcgcggccgctttgccggcggtctcc
tttggagccacgtccctggacacgctctccgacttcagtgcaactggtatcgcaggcttt
caaacggctgcagctccggtgatgcgacctccaaagaaaatctataaagagacgaacatc
ccggcactggtggcggcctccaacccgctgtcctccactcaccagttcctgcaggcctgc
gctgcctgtttccctcggaaaggtcgagggatttatacatttgttcacaagcccgacctg
gagcacagctgtcagcgagacattctactgtgcagacgggaggcgggttgtccttcggag
tggacccgagtacgacagattcccaactggagttccttcagcgggccgttcgttctctgc
aaagagctgctgaagtctggggatttgggcctgtgcaagttcggagaaaattgcacgttt
gcctacaaccagctggagatcgacgtttggaccgcggagcggaaaggcacgctggaccga
aacctgctgtttgacacgtcgggtttgaaactggacccggtgaacagcatcatccgcctt
ctgagggaggacaagggcactttcatgttcctctgccaggaatgctacgacggtaaacct
cgaatcatcagtaagcgttgccgaggcgatcacgccgtctgctccaacctggacgctcgc
cacaccttcgatgccaataagtgcttggcgtttgtggtgcagaccctcagcgtcaactac
agaaaggtccgaccgctgagcatcctatgccacttggatttgtgccgtcaagccatccgg
tacggctgccagagagaggacggctgcaattttgcccactctgtcatcgagctcaaaaca
tggagggtgcagcgcgacacaggtatcagccccgaagaaattgtgaaagtatcgacaaaa
tacaacgacaatcaggagcaaaacaaacataacggaaatagacagccgtcttctggaggc
gatgggagcaaaccaagaggaggagggaagagtctgaacatgaagatgaagttttcctgt
gctcagtgcttgcgggacggcctgatccgtgagccagacaaagccctgaagcactgcacg
gcaaaggcccggcacacgtggactaaagagaggtgggtgctgctggtcatgtccttggag
agaaggaaatgggttcaggtccgaccgctgccacacgccaagaacttccctgtgcattat
gatatatgcacccaggttctgaagagggggaaatgtaactactcggggaactgcaccttc
gctcacagccaagaggagagggagatgtggacatatatgaagaataatgaattgagagaa
atgcagcagatatacgacatgtggctgtcgttaaccgcccacgaccggcaagaagatgga
gccatgctgacccagccggtcccaggagaaagatgtatcatcatgccgactgactacgct
gaacccatgactggcttccactgtcgcctgtgtggtaaacacagtaacggggagcgtcag
tggcagcagcacatctccactgagaagcacaaggaccgggtgttcagctgtgagggggag
gacgaagctctgacgtggagctaccgcttccccggaccgtgctttgaaatctgccccaag
tctgacggcggctgtcccgacggtgtgagctgcgactacgcacacagcgcggaggagctg
cgcgagtggacggagagacgagatttcctgcgacggaagctggccggagccagggcggac
atgctcatcatgcctgacgagcatgactttgggaagttcaactttctacttcaggactga
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