Pseudoliparis swirei (Mariana hadal snailfish): 130188878
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Entry
130188878 CDS
T09868
Symbol
gjc1
Name
(RefSeq) gap junction gamma-1 protein
KO
K07616
gap junction gamma-1 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130188878 (gjc1)
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130188878 (gjc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
IMUP
Connexin40_C
Motif
Other DBs
NCBI-GeneID:
130188878
NCBI-ProteinID:
XP_056263395
LinkDB
All DBs
Position
23:complement(15469725..15533114)
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AA seq
484 aa
AA seq
DB search
MSWSFLTRLLEEIHNHSTFVGKLWLTVLIIFRIVLTAVGGESIYYDEQSKFVCNSGQPGC
ENVCYDAFAPLSHVRFWVFQIILVAMPSLMYLGYAVNKIARVDESKGGAGAAAVRTGGGG
GYTHRRPRKICFGERQHRGIEETEEDQEDDPMIYEVPEVEPPKRPRDPLQPAPKPKTRHD
GRKRIRDEGLMRVYVLQLVIRTLLEAGFLAGQYLLYGFHVTPVFVCARLPCPHSVDCFVS
RPTEKTIFLRIMYGVTVLCLALNIWEMLHLGIGAVCDILRRRRRPPREDEHQLGLLSANG
GVEGSVGGTGPEASSEGGLGEDGAADYVGYPFSWNTPSAPPGYNIVVKPEQMPYTDLSNA
KMACKQNRANIAQEEQQQFGSNEENFPTGGEARVALNKDLIQQAHEQLEAAIQAYSQQHR
AEEQLGDDQEDKPQSNIIQPHPQPQPQKERKHRFKHGKGGNSAGGSSSNSSSSKSGEGKP
SVWI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagctggagcttcctcacgcggctgctggaggagatccacaaccactccaccttcgtg
gggaagctgtggctcaccgtgctcatcatcttccggatcgtgctcacggcggtcggggga
gagtccatctactacgacgagcagagcaagttcgtctgcaactcgggccagccgggctgc
gagaacgtctgctacgacgccttcgcgcctctctctcacgttcgcttttgggtcttccag
atcatcctagtggcgatgccctctctcatgtacttgggctatgccgtcaacaagatcgcg
cgagtcgatgaatccaaaggaggggctggcgccgccgcggttagaacggggggaggagga
ggctacacgcacaggaggcccaggaagatctgcttcggagagcggcagcaccggggcatc
gaggagaccgaggaggaccaagaggacgaccccatgatctacgaggtgccggaggtcgag
cccccgaaaaggccgcgggatccgctgcaacccgcacccaaacccaaaacccggcacgat
ggccgcaaacgtatacgagacgaggggctgatgcgggtctacgttttgcagctggtgatt
cgcacgctgctcgaagccggcttccttgcaggccagtatttgctgtacgggtttcacgtg
acgcccgtgttcgtgtgcgcgaggctcccgtgtccccacagcgtcgactgcttcgtgtcg
cggccgacggagaagacgatcttcctgcgcatcatgtacggcgtcaccgtcctttgcctc
gcgctcaacatctgggagatgctccacctggggatcggtgccgtttgtgacattctgcgc
cgccgccgccgcccgccccgggaggacgagcaccagttgggattgctgagcgccaacgga
ggcgtggaggggtcggtcggcgggacggggcccgaggcgagctctgagggagggctgggg
gaagacggggccgcggactacgtcgggtaccccttctcgtggaacacgccgtcggctccg
cccggctacaacatcgtggtgaagccggagcagatgccctacacggacctgagcaacgcc
aagatggcatgcaagcagaaccgggccaacatcgcccaggaggagcagcagcagtttggc
agcaatgaggagaacttccccaccggaggggaggcccgtgtggccctgaacaaggacttg
atccagcaagctcacgagcaactggaagcggccatccaggcctacagccagcagcaccgg
gcggaggagcagctcggggacgaccaggaggacaagccccagagtaacatcatccagcct
catccgcagcctcagcctcagaaagagcgcaagcatcgattcaaacacgggaaaggaggc
aacagcgcaggaggaagtagcagcaacagcagcagcagcaaatccggagagggtaagccc
tccgtgtggatttaa
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integrated database retrieval system
