Pseudoliparis swirei (Mariana hadal snailfish): 130188886
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Entry
130188886 CDS
T09868
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130188886 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130188886 (gtf2f1)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
130188886 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
130188886
NCBI-ProteinID:
XP_056263407
LinkDB
All DBs
Position
23:complement(8363625..8369013)
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AA seq
534 aa
AA seq
DB search
MTSLGSSSSSATEYTVRVPKNTSKKYNLMAFNAGDKVNCSTWTQARMERDMSGRRIYGDE
ETADGAAGSEFGKKQREEARRKKFGIVKREFKVEDQPWILKINGKAGKRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGGNDDDDDENEKSGKKKKKGGGRGGDLRIHDLEEDLEMSSDDSDSSLGDDGES
KAKSKKNAGKGKAKKKKKRKSSDKEALEDSDDGDYEGLEVDYMSDESSSEEEPEKGKIRK
GEDHPKGIDEMSESEEESEEEKANEEEAKEEEEEEEGKKTPVQAEKKKKKDSSGESESSD
DSDIDGETPSALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQ
GKRPTPGPSADSPAAKRLKMEPSSQSPAPSGKSTPQPPSGKSTLSSSDVQLTEEAVRRYL
IRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacctccctggggagcagtagttcctcagccacggaatacacagtgcgagtccccaaa
aacaccagcaaaaagtacaacctcatggctttcaatgctggagacaaagtcaactgttca
acctggacacaggctcgtatggaaagagacatgagtggccggcggatatatggggacgaa
gagacggccgatggcgcagccggcagtgagtttggcaaaaagcagcgcgaggaagcgcgc
cggaagaagtttggtatcgtcaaacgagagttcaaagtggaggatcagccctggattctc
aagatcaatggcaaggccggcaagaggttcaaaggtctaaagaaaggcggtgttacagaa
aatgcatcctactacatctttacccagtgtcctgatggagcgttcgaggccttccctgtc
cacggctggtacaactttacgccgcaggccaagcaccgaaccctcactgctgaggaggct
gaggaggagtggggcagaagaaacaaagtggtgaatcacttcagcatcatgctgcagaga
cgtttccgggagcaggagcgtggcggtaacgatgatgatgatgacgagaatgagaagtcg
gggaagaagaaaaaaaaggggggtggcagagggggcgatctgcgcattcacgacctggag
gaggacctggagatgagcagcgatgacagtgacagcagtctgggggacgacggagagagt
aaggcaaagtcgaagaaaaacgcagggaaaggaaaagcaaagaagaagaagaagagaaag
agcagcgacaaagaggccttggaggacagcgatgacggcgactacgagggtctcgaggtg
gattacatgtcggatgaaagcagttcagaagaagagccggaaaagggaaagatcagaaaa
ggagaggatcatcccaaagggatcgatgagatgtccgaaagtgaggaagagagtgaggag
gagaaagccaacgaagaggaagcaaaagaggaggaagaagaagaggaaggaaagaagacg
ccggtccaagcggaaaagaagaagaaaaaagacagcagcggagagtccgaaagctccgac
gacagtgacatcgatggagagactccctccgcgctgttcatgaagaagcgcacgcctcct
aaacgtggaggacgtggctctgcaggcagctccaggaccggcagtcgccccgggacccca
tccatcgactccgcctccacctccaacacgctccgcgctgctgccagcaagctcgagcaa
ggtaagagaccgactccgggtcccagcgccgactctccagctgccaaaaggctcaaaatg
gagcccagcagtcagagcccagctccctctgggaagagtacgcctcaaccaccatcaggc
aaatccactctcagctccagtgacgtgcagctgacggaggaagcagtccggcgatacctg
atccgtaaaccgatgaccaccaaagacctgctgaagaagttccagaccaagcgcaccggt
ttgagcagcgagcagaccgtcaacgtgctggcacagatcctgaagcgcctcaatccggag
cgcaagaatgtgaacgacaaaatgcacttctacctcactgagtaa
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