Pseudoliparis swirei (Mariana hadal snailfish): 130188907
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Entry
130188907 CDS
T09868
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130188907 (ppfia3)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130188907 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
130188907
NCBI-ProteinID:
XP_056263442
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All DBs
Position
23:complement(3711998..3745555)
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AA seq
1250 aa
AA seq
DB search
MMCEVMPTISEDGRGGGGGGSTSPVGGGGGMGSIGGLGNTRGGGGGGSGGSGGSSDEGGS
TGNLEALMVNMLTERERLLESLRDTQDCLGTAHLRLRDLGHEKESLQRQLSIALPQEFAV
LTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPA
GVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERVASLEEELQSSSQEVVSLREQIKR
RQQGLEGGKERLPNGPSSAILNGDGDVDRQREGEIERQRSELGQLKERLALMCRQVGEIE
EQLTSARRELARSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDTKD
KLENELASKDSLYRQSEEKNRQLQERLDDSKQKLQQTLQRAETLPEIEAQLAQRVAALTK
AEERHGNFEERLRQMESQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQL
HLKERMAALEEKNALSEELSTMKKLQDDLLANKDQLIVELERLQLELDQLRARPGGSYSS
RSLPGSALELRYSHGCGSLPTGSTTYLDSFGVASSSGGGGLVRRSHRARWSSGRDDSAKN
LGAALCVQYPDWESGALLGSGFEPGLDVGCSDDEDEDGDRRFGSELLSPSGQTDVQTLAI
MLQEQLEAINKEIKLIQEEKENTELRAEEIESRVSVALEPPSSLGRDGAGGRGFIPSSIT
SSTLASPSPPSSGRSTPRLPRSPARETDRQNSKEEERSLALLDSTPPSTPRALRLDCTTL
THPGGMLDDAREYRSLSVDGSSSHSSQDSLHKSSKKKSIKSSIGRLFGKKEKGRMGQPGR
DGSASLASTPSEETAAGDPMGLNKTGTLGPADKDRRSKKKHELLEEACRQGLPFASWDGP
TVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEM
VSLTSPSAPASTRSSTSNVWMTHAEMESLNAATKPPEFNEFSWDQILAYGDMNHEWVGND
WLPSLGLPLYRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYD
RKELERRSQESVHHNKDVMVWSNERVMCWVQAIGLKEYGDNLRESGVHGALLALDDTFDY
TDLALLLQIPNQSTQARQLLEQEYNSLISMGTERRPDEQDGAKTFTRSPSWRKMFREKDL
RGVTSDSAETLPANFRASAISTPSVTLRKVQSDASSGARGEAASVRTYSC
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctcggaggacgggcgcggaggaggaggaggaggg
tcgacctccccggtggggggcggaggagggatgggaagcatcgggggcttagggaatacc
cgtggcggtggcggcggcggtagcggcggcagcggcggcagcagcgacgagggcggcagc
acggggaacctggaggccctgatggtcaacatgctgacggagagggagcggctgctggag
agcctgagggacacgcaggactgcctgggcacggctcacctgcgcctccgggacctcggc
cacgagaaggagtcgctgcaaaggcagctgtccatcgccctgccgcaggagtttgccgtg
ctgaccaaggagctgaacctgtgccgggagcagctgctggagcgcgaggaggagatcgcg
gagctgaaggcggagaggaacaacacgcggctgctgctggagcacctggagtgcctggtg
tcgcgtcatgagcgcagcctgaggatgacggtggtgaagcgccaggctcagtccccggcc
ggcgtctccagcgaggtggaggtgctcaaggcgctgaagtctctgttcgagcaccacaag
gcgctggacgagaaggtccgcgagcggctgcgcgtggcgctggagcgcgtggcgtcgctg
gaggaggagctgcagtcctcctcccaggaggtcgtgtctctcagggaacagatcaagcgg
cggcagcaaggcctggaaggcggcaaagagcggcttcccaacggaccgtcgtcggccatc
ctgaacggcgacggcgacgtggaccgtcagcgagagggcgagatcgagcgccagaggtcc
gagctcggtcagctgaaggagagactggccctcatgtgcagacaggtcggggagatcgag
gagcagctgacgtccgccaggagggagctggcccgatcggaggaggccaaccagaaactg
cagagggatgtgaaggaggcgctctgtcagcgggaggacatggaggagaggatcaccacg
ttggagcgcaggtacctgagcgcccagagggaggcgacgtcgctccacgacaccaaagac
aagctggagaacgagctggccagcaaggactcgctctacagacagagcgaggagaagaac
cgacagctccaggagcgtctggacgactccaagcagaagctgcagcagacgctgcagaga
gccgagacgctgccggagatcgaggcgcagctcgcccagagggtggcagcgctcaccaag
gcggaggagcgtcacggcaactttgaggagcgcctgcgacagatggagtcgcaactggag
gagaagaaccaggagctacagagggcgaggcagagggagaggatgaacgacgagcacaac
aagcgtctctccgacacggtggacaagctgctgtccgagtccaacgagcggctgcagctg
cacctgaaggagcgcatggcggcgctggaggagaagaacgctctctctgaggagctgtcc
accatgaagaagctgcaggacgacctgctggccaacaaggaccagctgatcgtggagctg
gagcgtcttcagctggagttagaccagctgagagccagaccggggggctcctactccagc
cgctctctgccgggcagcgccctggagctccggtattcccacggctgcggctcgctcccg
accggctccaccacctacctggactccttcggcgtggcctcctcctccgggggggggggc
ctggtccgccggagccaccgcgcccgctggagctccggcagagacgactccgccaagaac
ctcggcgccgctctgtgcgtgcagtacccggactgggagagcggcgctctgctgggctcc
gggttcgagccgggcctcgacgtgggctgctccgacgacgaggacgaggacggggaccgc
cgcttcggctcggagctcttgtcccccagcgggcagacggacgtgcagacgctcgccatc
atgctgcaggaacagctggaggccatcaacaaggagatcaaactcatccaggaggagaag
gagaacacagagttgcgggccgaggagatcgagagccgggtcagcgtggccctggagccg
ccgtcctccctggggagggacggcgcgggggggcggggcttcatcccctcctccatcacc
tcctccaccctggcctccccctccccgcccagctccgggcgctccaccccgcggctgcct
cgctctccggcccgcgagacggaccgacagaacagcaaagaggaggagcgctccctcgct
ctgctcgactccacgcctccttccacgcctcgcgccctgcggttggactgcaccactctc
acccacccgggggggatgctcgacgacgcgcgggagtaccgcagcctctcggtggacggc
agcagctcccacagcagccaggactcgctgcacaagtccagcaagaagaagagcatcaag
tcgtccatcggccggctcttcgggaagaaggagaaaggccggatgggccaaccgggccgg
gacggctccgcctccctcgcgtccacgccctcggaggaaacggcggccggagacccgatg
gggctgaacaagacggggacgctgggcccggcggacaaagaccggcggagcaagaagaag
catgagctcctggaggaagcgtgtcgtcaaggccttccctttgcatcctgggacggcccc
actgtggtttcctggctggagctgtgggtgggcatgccggcgtggtacgtggcggcgtgc
cgcgccaacgtgaagagcggcgccatcatggccaacctgtcggacacggagatccagcgg
gagatcggcatcagcaacccgctgcaccgcctcaagctgcggctcgccatccaggagatg
gtgtccctcaccagcccgtcggcgccggccagcacccgctcctcgaccagtaacgtgtgg
atgacccacgctgagatggagtccctgaacgcagccaccaagcctccggagttcaatgag
ttcagctgggatcagatcctggcctacggggacatgaaccacgagtgggtgggcaacgac
tggctgcccagcctcggcctgccgctgtaccgcagctacttcatggagtccctggtggac
gcccgcatgctggaccacctgaccaagaaggagctgaggggccagctcaagatggtggac
agcttccatagggtcagcctgcattacggcatcatgtgcctgaagcgcctcaactacgac
cgcaaggagctggagaggaggagtcaggagagcgtccaccacaacaaagacgtgatggtg
tggtccaacgagcgtgtgatgtgctgggtgcaggccatcggcctgaaggagtacggggac
aacctccgggagagcggcgtgcacggcgccctgctggcgctggacgacaccttcgactac
accgacctggcgctgctgctgcagatccccaaccagagcacgcaggccagacagctcctg
gagcaagagtacaactccctcatctccatgggaacggagaggcgacccgatgagcaggac
ggggcgaagacgttcacgcgctcgccctcctggaggaagatgttccgggagaaggacctc
cggggcgtgacctccgactccgccgagacgctgcctgccaacttccgtgcctcggccatc
tccacgccgtccgtcaccctgaggaaggttcagagcgatgccagctctggagcccggggg
gaagccgcctccgtgaggacgtactcctgctga
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integrated database retrieval system
