Pseudoliparis swirei (Mariana hadal snailfish): 130188942
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Entry
130188942 CDS
T09868
Symbol
nbr1b
Name
(RefSeq) next to BRCA1 gene 1 protein isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130188942 (nbr1b)
04137 Mitophagy - animal
130188942 (nbr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130188942 (nbr1b)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130188942 (nbr1b)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
130188942 (nbr1b)
Pexophagy
Other pexophagy associated proteins
130188942 (nbr1b)
Aggrephagy
Cargo receptors
130188942 (nbr1b)
Xenophagy
130188942 (nbr1b)
Other autophagy associated proteins
Midbophagy
130188942 (nbr1b)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
130188942 (nbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
130188942
NCBI-ProteinID:
XP_056263486
LinkDB
All DBs
Position
23:complement(24080875..24124209)
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AA seq
943 aa
AA seq
DB search
MDFYINLKVNFRGNSKNFLLSGSETKSWESMEAMVKRSFGLCSLQLTYFDEENEEVSINS
QGDYEEALKSAARQGNRLHMNVYETRGQPARGPASKAGGTEPKRGFRPPQHCPALAQVVS
RKVQAAVPEQGPVMLKDMKGTKEEDKTPPAWFTSYMDKFKDQVVREAVEKICREFSGQCC
IHKPLGGAAAGGRGEAQQVPDGSSSALPGAPSSSTPPCSSCRGRTTGGGYQCSVCTSCTL
CEPCSFSHDPSHNLVRARTPLSIPEHGSPAPDHSRFYRRGDRSFRKAEKQRLKAEKGLLK
AEVKEIRKQLRMERRGIQWSSSHRDGSSSPVLLQPRATEHSSPERPKRPCPLVAPAMTAA
FLDENLPDGTRLRPGTKFIKYWKMRNTGSVCWSADTKLKFMWGNLAVGSGARWREVSVPF
LQPGQVGIVSVALCAPAVEGSYTSHWRLAHAGEQLGPRVWCSVVVDALAPAPVMADGILV
SPCVTPQGKNPVATEGKAAREPPLMSVDQEENYIPSVDLLTAQDLLSFELLDINIVQELE
SDPNNPPADVPQGAESGAEGGGVPAQEEGEEDISGTQFVCETVIRSMALEEAPDHAPMRA
VRLAAPGSSSSCVKGRAGTDGSRSQSPVRPPAPKASLPAPLHVASGLGPGPSPAPSSLIA
PPGPFALQQHSAEGEAPPTEKEGVEKREGTRSRSSSTSEEDYIIILPDCFDTSRPLGESM
YSSAVSQPGDVPAKTPTDTDPPAPQGEELGEAEDPNSANDMLCTSQTLDDEPLTPEVVAP
PQAPPTQSPGSGAGGAGGAGGAGPDVAPAVAPAVAPAACGQGAEGSEDVSGPEHTQTDDA
EVTEDTEDDSPEDPRLPGLTSGLVKGALSVAASAYKALFTGHGPTQPPLDASTQETMMAV
LVEMGFGDRPLNQRLLKKYNYNLLDAVNELVQMTDNDWYSTRY
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacttctacatcaatctgaaggtgaatttcagagggaattctaaaaatttcctgctg
tcgggatccgagacgaagagctgggagtcgatggaggccatggtgaagcgctccttcggc
ctgtgcagtctccagctgacgtacttcgatgaggagaacgaggaggtgtccattaacagc
caaggggactacgaggaggcgctgaagagtgcagcgaggcaggggaaccggctccacatg
aacgtgtacgagactcgaggccagccggccaggggccccgccagcaaggccggcggcacg
gagcccaagaggggcttcagacccccccagcactgccccgctctggcccaggtggtcagc
cgcaaagtccaggctgccgttccagagcagggtccggtgatgctgaaggacatgaagggg
accaaagaagaagacaagactcctccagcctggttcacctcttacatggacaagtttaag
gaccaggtcgtccgggaggcggtggagaagatctgccgggagttctctggacagtgctgc
attcacaagcccctaggaggagcagcagcaggaggtagaggggaggcccagcaggtcccc
gatggttcctcctccgctctgcccggagctccatcctcctccacgcctccctgctcctcc
tgccgggggcggaccacgggaggaggctaccagtgcagtgtgtgtacttcctgtacgctg
tgcgagccctgcagcttctcccatgaccccagtcacaacctggtgagggcccggaccccc
ctgtccatccccgagcacggctccccggcccccgaccacagcaggttctaccggcgaggc
gaccgcagcttcaggaaggcggagaagcagcggctgaaagcggagaagggccttctgaaa
gcagaggtcaaggagatccggaaacagctgaggatggagaggcggggcatacagtggagc
tcctcccacagagatggaagctcctcccctgtcctgctgcagcctcgagccaccgagcac
agcagccctgagcggccgaagcgtccgtgtcccctggtggctccggccatgacggcggcc
tttctggacgagaaccttcccgatggaacccgactgcggcccgggaccaagttcatcaag
tactggaagatgaggaacactggatccgtctgctggagcgcggacaccaagctgaagttc
atgtgggggaacctggcggtcggctctggagcccgctggagagaagtgtcggttcccttc
ctgcagccaggacaggttgggatcgtgagcgtggcgctgtgtgctccggccgtggagggc
tcctacacctcccactggcgcctggcccacgcgggggagcagctgggcccccgggtctgg
tgcagcgtggtggtggatgccctggccccggcgcccgtgatggctgatgggatcctggtg
tcgccgtgcgtcacgccgcaggggaagaacccggtggccacggagggaaaggcggccaga
gagccgcccctgatgtccgtggaccaggaggagaactacatcccctctgtggacctgctc
actgcccaggatcttctgtcttttgagctgctggacatcaacatcgtccaggagctggag
agtgaccccaacaacccccctgctgatgtccctcagggggcggagtctggagcagagggg
ggcggagtcccagctcaggaggaaggggaggaggacatcagcgggactcagtttgtctgt
gagactgtgattcgctccatggcgctggaggaggcccctgaccacgcccctatgagagcg
gtgcgtctggctgctccgggctcctcctcttcctgtgtgaagggtcgagcggggaccgac
ggcagccgctctcagagccccgtgaggcccccggcgccgaaggcctccctgccggctccg
ctgcatgtggcctccggcctgggccccggccccagccccgccccctcctcgctcatcgct
ccgcccgggcccttcgctctgcagcagcactcagcggagggggaggcgccccccacggag
aaggagggagtggagaagagagaagggacgaggagtcgctcctcctccacctcggaggag
gattacatcatcatcctccccgactgctttgacaccagccggccactgggggaatccatg
tacagctccgctgtgtcccagccgggggacgtcccagccaagacccccacagacacagac
ccccccgccccacagggggaggagcttggagaggcagaagaccccaacagcgccaacgac
atgctctgtacctctcagacgctggacgacgagcctctgacccctgaagtggtggctccg
cctcaagccccgcccacgcagagtccagggagcggagcaggaggagcaggaggagcagga
ggagcagggccagacgtggcccctgccgtggcccctgccgtggcccctgccgcctgtggg
caaggagcagagggctctgaggacgtctctggccctgaacacacgcagacggatgacgct
gaagtgactgaagacacagaggacgacagccctgaggaccccaggctcccgggcctcacc
agcggcctggtgaagggagcgctgtcggtcgctgcgtctgcctacaaagccctgttcacc
ggacacggccccacgcagcctccactggacgcctccacccaggaaaccatgatggccgtg
ctggttgagatgggttttggggaccggccgctaaaccagcggctgctgaagaaatacaac
tacaacctgctggacgcggtcaacgagctggttcagatgaccgacaacgactggtactcg
acccgctactga
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