Pseudoliparis swirei (Mariana hadal snailfish): 130188952
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Entry
130188952 CDS
T09868
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04137
Mitophagy - animal
pswi04144
Endocytosis
pswi04340
Hedgehog signaling pathway
pswi04350
TGF-beta signaling pathway
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130188952 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130188952 (smurf2)
04350 TGF-beta signaling pathway
130188952 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130188952 (smurf2)
04137 Mitophagy - animal
130188952 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
130188952 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130188952 (smurf2)
04121 Ubiquitin system [BR:
pswi04121
]
130188952 (smurf2)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130188952 (smurf2)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130188952 (smurf2)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130188952 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
130188952 (smurf2)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
HECT type E3
130188952 (smurf2)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130188952 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
130188952
NCBI-ProteinID:
XP_056263504
LinkDB
All DBs
Position
23:18957931..18996841
Genome browser
AA seq
777 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKIVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISMWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGCKYQRLDLN
KLSPNDSDTVQGQIVVSLQSRDRIGTGGSVVDCSRLFDNDLPDGWEERRTASGRIQYLNH
ITRTTQWERPTRPASEYSSPGRPLSCIVNENTPVSTNGATPTTTTTVLTPINGDQRIPER
RVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTHTGVSTWHDPRVPRDLSNV
NCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPSPNGSRGAI
ESQNVSRQNQLKDQAQQALVSPAQLLEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAG
HCRIEVSREEIFEESYRQVMKVRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLN
PYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQ
LLGKPITLDDMESVDPELHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSI
SVSQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKPFDEKELELIVCGLGK
IDINDWKSNTRLKHCTAESSSVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQG
AAGPRLFTLHQIDVSTNNLPKAHTCFNRIDIPPYEQYDKLYDKLLTAIEETCGFAVE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagtccggcggaacggccccgtgaagctgcgattaacagtcctctgc
gccaaaaacctggtgaagaaggacttcttccgcctccctgatccctttgccaagattgtc
gtggacgggtcggggcaatgccactcgacagacactgtgaggaacacgcttgaccccaag
tggaatcagcactatgacctttacatcgggaaatccgactccatcaccatcagcatgtgg
aatcacaagaagatccacaagaagcagggggcggggttcctgggctgcgtccgcctcctg
tccaacgccatcaaccgcctcaaagacacgggctgtaagtaccagagactagacctgaac
aagctgagtcccaacgacagcgacacggtccaaggccagatcgtggtgagcctgcagtcg
agggaccggatcggcaccggcggctccgtggtggactgcagtcggctgtttgacaacgac
ctccccgacggctgggaggagaggaggacggcgtccgggcggatccagtacttgaaccac
atcacacgcaccacacagtgggagaggccgaccaggcccgcctcagagtactccagcccc
ggccggcctctcagctgcatcgtgaacgagaacacgcccgtcagcacaaacggggccacg
cccaccaccaccaccacggtgctgacgcccatcaacggtgaccagcggatcccggagaga
cgggtccgctcgcagcggcaccgcaactacatgagcagaacccacctgcacacgcccccg
gacctccctgagggatacgagcagaggaccacgcagcagggccaagtgtacttcctccac
actcacacgggtgtcagcacgtggcacgacccccgagtaccgagagacctgagtaacgtg
aactgtgaggagctcggtcctctgcctcccgggtgggagatccggaacaccgccaccggg
agggtctacttcgtcgaccacaacaaccggaccacgcagttcaccgacccgcgcctctcc
gccaacctgcatctcgtgctcaatccgagtccgagccccaatggctctcgcggagccatc
gaaagtcagaatgtcagtcgtcagaaccagttgaaggaccaggcccagcaggctctggtg
tcccccgctcagctcctggaggaggccgagtgcctcacggtgcccaagtacaagagggac
ctggtccagaagctcaagatcctccgccaggagctgtcccagcagcagcctcaggccgga
cactgccgcatcgaggtgtcccgcgaggagatcttcgaggagtcgtaccgccaggtgatg
aaggtgaggccgaaggacctgtggaagcggctcatggtgaagttcagaggcgaggagggg
ctggactatggaggagtggccagggagtggctctacctgctgtcgcacgagatgctcaac
ccgtactacggcctgttccagtactcccgcgatgacatctacacgctgcagattaacccc
gactctgccgtcaaccccgagcacttgtcctactttcacttcgtgggccgcatcatgggc
atggcggtgttccacggccactacatcgacggaggcttcacgctgcccttctacaagcag
ctgctgggcaaacccatcacgctggacgacatggagtcggtggaccccgaactgcacaac
agcctcgtctggatcctggacaacgacatcacaggtgtgctggaccacaccttctgcgtg
gagcacaacgcctacggggagatcatccagcacgagctcaagcccaacggcaagagcatc
tccgtctcccaggacaccaagaaggagtacgtgcggctctacgtcaactggcgcttcctg
cggggcatcgaggcccagttcctggcgctgcagaagggcttcaacgaggtcatcccccag
cacctgctcaagcccttcgacgagaaggagctggagctgatcgtgtgcggcctcggcaaa
atcgacatcaacgactggaagtcgaacacgcggctcaagcactgcacggcggagagcagc
agcgtcaagtggttctggaaggccgtggagtccttcgacgaggagcgcagggcccggctg
ctgcagttcgtcaccggctcctccagagttcctctgcaaggcttcaaggccctccaaggt
gctgccggcccgcgactcttcaccctccaccagatcgatgtcagcaccaacaacctgccc
aaagcccacacctgttttaaccggattgacatccctccctacgagcagtacgacaaactg
tacgacaagctgctgacggccatcgaggagacgtgcggcttcgctgtggagtga
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