Pseudoliparis swirei (Mariana hadal snailfish): 130189023
Help
Entry
130189023 CDS
T09868
Symbol
ppl
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130189023 (ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130189023 (ppl)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
130189023 (ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
Spectrin
HALZ
Motif
Other DBs
NCBI-GeneID:
130189023
NCBI-ProteinID:
XP_056263603
LinkDB
All DBs
Position
23:complement(23353343..23374875)
Genome browser
AA seq
1759 aa
AA seq
DB search
MFKKKSRSTAITQPTASAPSTELSSLIDKLQKNADKVEKFSYDIEQNLNKDVSKINEGKQ
PLYQDDTNKRILSSLELLSGLDEDAVNAKRLQHPQAEMIEKDMRQLREKVLKLKEDHDRI
YHLTRTEGKPSINWGNMMDEKLDNLNNKGFGQDLPSVENEVEEHNIFHSEVEALAPHISS
GGDKEYISGLQSKYAKLLASSSARQRNLLSLRNYMQSCTNELYWMDQQAEERINYDWSDT
NLDYPARQRQYENFISKCLESKEATVTKLNEDGEKLIVAEHPGKNVIEAHMEAVHADWKE
YLNLLICEENHLKHMDEYHKFQKEARDTQDLLKRMDTDLNQKYNPEFKDMYQMEGLITDL
DDQAKAVDHFDERVKTIQKRSLQVLPLKYRRETPPKQVPVEALCEFDTDEGQILRGERYT
LLRNNVAKWDVKDAAGHQFTAPAVCFMIPPTAPEALAVSDSLAKQQNGVKQKMASSAATL
QKRFAELKKESGTGTATDKQEQQCRQLMAGLDKVVGDLDKQEKGIYARVRPPLEQSRPLQ
DSADRLQDMKDIAAAVGKIEPEKSSKVQEAKSFLVSNPTCASTPQLHGKVDEANNKYTKI
EQLLQSSQEKLKNANQLETSLQNGKTLLSTYENKLAREEVAPSDITSIEKTQRELADTAS
DLRSKRSVIAETEQNLRSARSSCDNMATKFQEHCPDIERQEGDVQKLNKRFNNLNRQTDT
RSQSLQRAKMSYNNYRKDYDNLNNWLSRVPNYEPRDTDDTRQVETKLKNQRNLLSDIARK
ESDLNNVSKNAQLYQHAVKDYENETEKFRSILDLEDGLVPQTYKRNRLESPAQIVKAEES
AIEAKFTEVNAVNKQRLQNLEFAQSLLNQQPEIPLIQSTNVKSVNAAAPGGEPWRVKKQL
DDEVQRREQLEREIETIQSDIYVLEGQKPQDTIVKKELIKKVADPQLDEEVHKVQQKLSE
ERRSTHVLVNDLEVLKIKLRGLETEVKEGAQQYTVKEVLRIERDRDQEDEMRKLREELDE
LRRQKLMKDNELIQIHKQVTLLAEEKSIEQEVITEEEVIKVQNDPQLETEYRVLLDRKQK
ETDGRKQLEDELQFLQEKLRRMEKEKSIAEEKISIKEVLKVEKDVIFEREVENLRRQYED
EKSKRRSSQREKADLQRKITSLEEEKSKVVVQEKVREIVRPDPKAENEVANLRLELVEQQ
RRFRDAELQLRSLTEEHTMLRNRGPQVEIKETIKEVIKYKTDPQTERELERLRNEIVDKT
HLTEKSEMEIRQLRDEIVRWKDTKPQVQTKEVVNEVMRYREDPKTKEEIETLKRKLADEQ
QKRLDLEGERSAQEEKIRLRKIDLSQVREKIVQQEVVKLEEDPLLRSECDSFSQNISNEQ
KQKESLKNELYQLQRQKADLDLQLEELERERRARREAELEIQRLRVTLHELELRDKENRE
KVTVKQKVVLQQDPQQEKEHSIIKLQLDEERHKRTLLEKELNILHQQQLTLEKIDVKERV
VRTEKVQIERDPEAEIDIENLKRTLEEEKRRRRELDQELASLTSRFSDMEFSNTKSSKEL
DYIRDESGRMQQENQRLQNEIRKLRAEIDITSKETRLITESAPREEGKNLELRLDSLQKE
LAELRGITSQKDVEIEGLQKNLVAVRMKKEQRESHLRRSIVVIDPDSGKEMRPEEAYKLG
LIDWKMFVNLQSQECDWEEISVKGPKGESSVLHDRKSGTKFSIDDALRLGHITNYQLQQY
INKEISIQEFGVLVSGKNK
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaagaagtccaggagcaccgccatcacgcagccgaccgccagcgctccgtcc
actgagctgagctctctgatcgacaagctgcagaagaatgctgacaaggtggagaagttc
agttacgacatcgagcagaacctcaacaaggatgtgagtaagatcaacgaggggaagcag
cctctgtaccaggatgacaccaacaagaggatcctcagctctctggagctgctcagcggc
ctggacgaggacgccgtcaacgccaagcgcctgcagcacccgcaggccgagatgatcgag
aaggacatgaggcagctacgtgagaaggtgctgaagctgaaagaggaccatgaccgcatc
taccacctgacccgcaccgaggggaagcccagcatcaactggggcaacatgatggacgag
aagctggacaacctgaacaacaagggcttcggccaggaccttccctcagtggagaacgag
gtggaggaacacaacatcttccacagcgaggtggaggctctggctcctcacatctcctcc
ggcggagacaaggaatacatcagcggcctccagtcgaagtacgccaagctcctggccagc
tccagcgctcgtcagcgcaacctgctgagcctgaggaactacatgcagagctgcaccaat
gagctgtactggatggaccagcaggcggaggagaggatcaactacgactggagcgacacc
aacctggactacccggcccgccagaggcagtacgagaacttcatcagcaaatgtctggag
tccaaagaagccaccgtcaccaagctgaacgaggacggggagaagctgatcgtggccgag
cacccggggaagaacgtcatcgaggctcacatggaggccgtgcacgcggactggaaggag
tacctgaacctgctcatctgtgaggagaaccacctcaagcacatggacgagtaccacaag
ttccagaaggaggcgcgtgacactcaagacctgctgaagcggatggacacggacctgaac
cagaagtacaacccagagttcaaagacatgtaccagatggagggcctgataacggatctg
gacgaccaagccaaggccgtggaccactttgatgagcgggttaagaccatccagaagcgc
agcctgcaggttttgcccctgaagtaccgccgtgagacgcccccgaagcaggtccccgtg
gaggccctgtgcgagttcgacaccgacgagggtcagatcctgcgtggggaacggtacact
ctgctgcggaacaacgtggccaagtgggacgtgaaggacgcagccggacatcagttcacc
gctccggccgtgtgcttcatgatcccccccaccgcccccgaggcgctggccgtctccgac
agcctggccaagcagcagaacggcgtcaagcagaagatggcgagcagcgcggcaacgctg
cagaaacgcttcgccgagctgaagaaggagagcggcaccggcaccgccacagacaaacag
gagcagcagtgccgccagctgatggccggcctggacaaggtggtcggtgacctggacaaa
caggagaagggcatctacgctcgagtgcgccccccgctggagcagagcaggccactgcag
gacagcgccgaccggctgcaggacatgaaggacattgctgctgccgtcggtaagatcgag
ccagagaagtcgtccaaagtgcaggaggcgaagagcttcttggtgtccaacccgacatgt
gccagcaccccccagctgcacggcaaggtggacgaggccaacaacaagtacaccaagatc
gagcagctgctgcagagctcgcaggagaaactgaagaatgccaaccagctggagacgtcc
ctccagaatggaaagaccttattgtccacctacgagaacaagctggcccgggaggaggtg
gctccctctgacatcacctcaatcgagaagacacagcgggaacttgcagatactgcctcc
gacctgaggtccaagaggtccgttatcgctgagacggagcagaacctgcgctcggccaga
agcagctgcgacaacatggccaccaagttccaagagcactgccccgacatcgagaggcag
gagggagacgtccagaagctcaacaagcgcttcaataacctcaacaggcagaccgacacc
aggtctcaaagcttgcagagagccaagatgtcgtacaacaattaccgcaaagactacgac
aacctgaacaactggctgtcccgcgtcccaaactacgagccccgtgacaccgatgacacg
agacaagtggagaccaagctgaagaatcagaggaacttgctctctgatatcgcaagaaag
gagtctgacctgaacaacgtgtccaaaaacgcccagctctaccaacatgctgttaaagac
tacgagaatgaaactgagaagttcagatccatccttgaccttgaagatggcctcgtccct
cagacatacaagaggaacagactggagtcgcctgcacagatcgtcaaagcagaggaatct
gctattgaggcaaagtttaccgaggtgaatgctgtgaacaagcaacggcttcagaatctg
gagttcgcccaaagtcttctcaaccagcaacctgagataccgttaatccagtctacaaat
gtcaagtcagtcaatgctgctgccccaggaggagaaccttggagggtcaagaagcagctg
gacgatgaggtccagaggagggagcagctagagagagaaattgagactatccagtccgac
atctatgtccttgaaggacagaagccccaggacacgattgtcaagaaggagctgatcaaa
aaggttgctgacccccagctggatgaagaagtccataaggtccagcagaaactctcagaa
gagcgccgctctacccatgtcctggtgaatgaccttgaggtattaaagataaaattgcgt
ggcctggaaacagaggtcaaagaaggggcccagcagtacacggtcaaggaggtcttgcgt
atcgaaagagatcgtgatcaggaggatgaaatgcgcaagcttcgggaagagctggatgag
ctcagaaggcagaagctgatgaaagacaatgagctgattcagatacacaagcaggtgacc
ctcttggctgaagagaagagcatagagcaggaggtgatcactgaggaggaggtgatcaaa
gtccagaatgatccccaacttgaaaccgagtaccgagtgctgcttgaccgcaaacagaag
gaaacggatggcaggaagcagctcgaggatgaactgcaatttcttcaagagaagctccga
aggatggagaaggagaagtcaatagccgaggagaagatttccatcaaagaggttctgaaa
gtagagaaagatgttatctttgaaagggaggtggaaaacctcagaaggcagtatgaagac
gagaaatccaaacggagatcatcacagagagaaaaggctgacctccaaagaaaaattacc
agcctcgaggaggagaagtccaaggtggttgttcaggagaaggtgcgggagatcgtccgc
ccagaccccaaagctgagaacgaggtggccaacctccggcttgaacttgtagagcaacag
aggcgcttccgggatgcagagctccagcttagatcactgacggaagagcataccatgctg
aggaacaggggacctcaagtggagatcaaagagaccatcaaagaagtcatcaaatacaag
acggatccacagaccgaaagagagcttgagcgacttcgcaatgagatcgtagataaaact
cacctcacagagaaatctgagatggaaatccgccaactccgtgatgaaattgtaagatgg
aaggacaccaaaccccaagtgcagactaaagaggtggtcaatgaagtgatgcggtacaga
gaagaccccaagacgaaggaggaaattgaaactctcaaaaggaaactggctgatgagcaa
cagaaacgccttgaccttgagggagaacgctccgcccaagaagagaagatcagactgagg
aaaattgacttgtctcaggtccgcgagaagattgtccagcaagaagtggtaaagctggaa
gaagaccctctcctcagatccgagtgcgacagcttctcacaaaacatcagcaatgagcag
aagcaaaaggagagcctgaaaaatgagctctaccaactgcagaggcagaaggctgacctt
gatctgcaactggaagaactggaacgcgagcgcagggcaaggcgcgaagcagaactggag
atccaaaggcttcgggtcacacttcacgagctggagctccgtgacaaggagaaccgggag
aaggtgaccgtcaagcagaaggtcgtcctgcagcaagatccccaacaggagaaggaacac
tccatcatcaaactacagctggacgaagagaggcacaaacgcactttgttggagaaagag
ttgaatatcctccatcagcagcagctcaccctggagaagatcgatgtgaaagaaagggtt
gtgcgcaccgagaaagtccaaattgaaagggacccagaggctgagattgatattgagaac
ctaaagaggactctggaagaggagaaaaggagaaggagagagctggaccaggagctggcc
agcctcacctcaaggttctctgacatggagttctcaaacacaaagtcttccaaggagctg
gactacatccgtgatgagagtggccgcatgcagcaagagaaccaaaggctgcaaaatgag
atacgcaagctccgggccgagatcgacatcaccagcaaagagactcggcttatcaccgag
tccgcaccgagggaggaaggaaagaacctggaactgaggctcgattcgctccagaaggaa
ctagcggagctcaggggcataaccagccagaaggatgtggagatcgagggtcttcaaaag
aacctggtggccgtgagaatgaagaaggagcagagggagagccatctgcgccgctctatc
gtggtcatcgaccccgattcaggcaaggagatgcgaccggaggaggcctacaaactcggg
ctgattgactggaagatgttcgtcaacctccagagccaggagtgtgactgggaggagatt
tcggtgaagggccccaaaggagaatcctccgttcttcacgacaggaaatccgggaccaag
ttctccatcgatgacgcgctgcgcctcggccacatcactaactaccagctgcagcagtac
ataaacaaagagatatccatccaggagtttggcgtcttggtgtcaggcaagaacaagtga
DBGET
integrated database retrieval system
