Pseudoliparis swirei (Mariana hadal snailfish): 130189037
Help
Entry
130189037 CDS
T09868
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130189037
03041 Spliceosome [BR:
pswi03041
]
130189037
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130189037
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130189037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
130189037
NCBI-ProteinID:
XP_056263626
LinkDB
All DBs
Position
23:complement(9015355..9023312)
Genome browser
AA seq
682 aa
AA seq
DB search
MSEFNAVPPPGSEDPLEAQAVLGNGAGAIIKDAFADAVQRARQIAAKIGGDAGPPMNNNT
ASDGFAFTAQKRQLEDADEPESKKLAGESDLDSANALSIGAQLAALSQQRPASSTEEYSV
PDSMVGLIIGRGGEHISKIQQESSCKVQIAPDSGGLPDRCVTLTGSQDSIQNAKSLLDEI
VSRGMGTPPSSYHESTNGENGTMHEMMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD
ASQGANVDKPLRIIGEPYKVQQAQEMVQEILRERDHGGFSERSDFGSRMGGGMDVSIPVP
RHSVGVIIGRNGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHVSGPPDRCEHAAQIINELL
QSIRVREEGQGPQGPPGPPGMPAGNRGRGGGQGSWGSPGGELTFSIPAHKCGLVIGRGGE
NVKSINQQTGAFVEISRQPPPNGDPNFKIFIIRGSPQQIDHAKQLIEEKIEGPLCHVSPG
PGGPGPAGPMGPYNPNPYNPRPPGAPGPPHGGPPGPQQYSPQGWSNSFQQWQPQAPHDPS
KAAANDPNAAWAAYYTQCYQQPSGAVPAQCPADPAGPAGSAQTSGDQTQPAQPAQPAQAP
GGQSDYTKAWGEYYKKMAQAGVSAPGTAAAAPGAAGGAASPPGGQPDYSAAWAEYYKQQA
AYYGQTGQAPGQQANPQQGQTQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagttcaacgcggtgcccccgcccggatccgaggaccctctggaagcacaggca
gttctcgggaacggagcaggtgccatcataaaagatgcgtttgcggatgcggtgcaaagg
gcccggcagatcgcagccaaaattgggggtgacgctggtcctcccatgaacaacaacact
gcatcggatggctttgcattcactgcacagaaacgccagctggaggatgcagatgaaccg
gagagcaagaagctggctggagagagcgacttggattcagccaatgcattgtctattggt
gcacagctagctgctctttcacaacaaaggcccgcctccagcacagaggagtacagcgtc
cccgacagcatggtgggactgattattggccgtggaggtgaacatatcagtaagattcaa
caggagtcaagttgcaaggttcagatagcgccagacagcggaggccttccagacaggtgt
gtcactctcacaggttcccaagactccatacagaatgccaagagtctgttggatgagatc
gtgtcacgagggatgggtacccccccctcctcctatcacgagtccaccaacggggagaac
ggcacgatgcacgagatgatgatcccagctggcaaggccggcctcgtcattggcaaggga
ggagagaccatcaaacagctacaggagcgtgcaggggtgaagatgatcctgatccaggat
gcctctcagggagccaacgttgacaagcccctgcgcattatcggagaaccttataaagtc
cagcaagcccaggagatggtgcaggagattctgagggagagagaccacggtggctttagt
gaaagaagtgactttggctcccgaatggggggaggcatggatgtgagtatccctgtacca
agacactcggtcggtgtgatcatcgggcgcaatggagagatgatcaagaaaatccagaat
gatgctggagttaggatacagttcaaacaagatgacgggactggtccagaaaaaattgcc
cacgtcagcggtccccctgaccgctgcgagcacgccgcacagatcatcaacgaactgctg
cagagcatcagggtcagggaggagggacaagggccacagggtcccccgggaccaccaggc
atgccggcaggcaacaggggccgaggcgggggtcaaggcagctgggggtcccctggaggg
gaattgaccttctctatccctgcccacaagtgtggactcgtgattggccggggaggagag
aacgtcaagtccatcaaccagcagacgggggcctttgtggaaatctctcgacagccgccc
cccaacggagaccccaacttcaagatttttatcattcgaggctccccgcagcagatcgac
cacgccaagcagctcattgaggagaagattgagggacctttgtgtcatgtcagccccggg
ccaggtggaccaggtcctgctggtccaatgggcccctacaatcccaacccatacaacccc
agaccgcctggggcgcccggaccaccgcacggtggccctccaggtcctcagcagtacagc
ccacaaggctggagcaacagcttccagcagtggcagccccaggcaccccatgaccccagc
aaggcagcagccaatgaccccaatgcagcctgggcagcctactacactcagtgctaccag
cagccatcgggggctgtgccggcccagtgccccgctgacccagctggcccagctggaagt
gcccaaacttcaggggaccagacccagcctgcccagcctgcccagcctgcccaggcgccg
gggggccagtcggactacaccaaggcctggggggagtactacaagaagatggcccaggca
ggtgtctctgctcctgggacagcagctgcagcgccaggagcagcagggggggcggcatcc
ccaccgggggggcagccggactacagcgcagcctgggcggagtactacaagcagcaggct
gcgtactatggacagacgggacaggcccccgggcagcaagccaacccccagcagggacag
acgcagtga
DBGET
integrated database retrieval system
