Pseudoliparis swirei (Mariana hadal snailfish): 130189053
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Entry
130189053 CDS
T09868
Symbol
tbc1d17
Name
(RefSeq) TBC1 domain family member 17
KO
K19945
TBC1 domain family member 17
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130189053 (tbc1d17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189053 (tbc1d17)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130189053 (tbc1d17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
130189053
NCBI-ProteinID:
XP_056263659
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All DBs
Position
23:complement(3760188..3769335)
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AA seq
634 aa
AA seq
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MEQNVEDYKLIFEKEGVYLHTNAKKSNQDTTIPGFIRIVERAGVPALEWSPLEDGGRSAP
AVLYTKKDRDGGEEDMNFDPGYEPDWAVISTVKRDREQVPVRDSGLWSFSLALSELYSLR
RARISLGKNFLVLTSRGGHPLPALHFHRGGTRELFSALQRYIMLDQSPVDGRLFLAYPHD
SGALSQSFEKLQLLDDGGVDLVSRFIHDPYATTFGGFSKVTNFFKAALKPPGSPGHFRTA
QDPSLPHQCDEEPGFELINCGVALGPRPDVTRGEPLDQWDEFLDPEGRVKNPEKIKELVF
RGGVTPFLRKEVWKFLLGFYPWDSTAKEREDILRLKTDEYFRMKVQWKSVGEEQEMRNSL
LRGYRSLIERDVSRTDRHNTFFSGNDNPGLTLLHDVLMTYCMYNFDLGYVQGMSDLLSPL
LFVTQNEVESFWCLTGFMALLHQNFEESQEAMKKQLLQLSILLKALDPELCDFLDSQDSG
SLCFCFRWLLIWFKREFSFEDILTMWEVLWSGLPCDNFHLLIACSILVSQRGELIGSDHD
FNTILKHINELTMKLDLQTVLRGAESIFLQLTQCKELSLKVQEVLGLYIPSSSEEDSPDS
SQASETRRLLASSPAGASSSSSSSSPAARVPTYP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacgttgaggattacaagctcatatttgagaaggagggcgtttacctgcac
acaaatgcaaagaagagtaaccaggacacgaccatcccggggttcatccgcattgtggag
cgggccggcgtgcccgctttagagtggagccccctggaggatggaggccgtagtgcaccg
gctgtactctacaccaaaaaggacagagacggaggagaggaggatatgaactttgacccc
ggctacgagccggactgggccgtcatcagcacagtgaagagagaccgggagcaggtcccc
gtcagagactcaggtctgtggtcgttctcgctggccctctcggagctgtactccctccgg
agggctcgcatctctctggggaagaacttcctggtgctgacgagtcgagggggccacccg
ctgcccgccctgcacttccaccgcggaggcacccgggagcttttcagcgccctgcagcgc
tacatcatgctggaccagtcgccggtggacgggcgcctcttcctcgcctaccctcacgac
tcgggcgctctctctcagtccttcgaaaagctgcagctgctcgacgacggaggcgtcgat
ctcgtttcgaggttcatccacgacccgtacgccaccacgttcggcggattctccaaagtc
accaatttcttcaaagcggccctcaaacctccgggctcccccggccacttccgcaccgcc
caggatcccagtttgccccaccagtgcgacgaagagcccggcttcgaactcatcaactgt
ggcgtggcgctcgggcccagaccggacgtgaccagaggagagccgctggaccaatgggac
gaattcctggacccagaggggcgagtgaagaacccggagaagatcaaagagctcgtattc
agagggggtgtcacaccgttcctgcggaaggaggtgtggaagttcctcctgggcttttac
ccgtgggacagcaccgccaaggaaagagaggacatcctgcggctcaagacggacgagtac
ttcagaatgaaggtgcagtggaagtcggttggtgaagagcaggagatgaggaactccctc
ctcagaggatacagaagcctgatagagcgagacgtcagcaggacggaccgacacaacacg
ttcttctccgggaacgacaacccaggactgactctgctgcacgacgtgctgatgacgtac
tgcatgtacaactttgatctcggttacgtccaggggatgagcgacctcctgtctcctctc
ctcttcgtcacccagaacgaggtggagtccttctggtgcctaacgggcttcatggcgctg
ctgcaccagaactttgaagagtctcaggaggccatgaagaagcagctcctccagcttagc
atcctgctgaaggctctggacccggagctatgcgacttcctggactctcaggactccggc
tctctgtgcttctgcttccgctggctgctcatctggttcaagagggagttttccttcgag
gacatcctcaccatgtgggaggtgctctggtccggtctaccctgcgacaacttccacctg
ctcatcgcctgctccatcctcgtgtcccagagaggcgagctgattggctcagaccacgac
ttcaacaccatcctgaagcacatcaacgagctcaccatgaagctggacctgcagaccgtc
ctgcgaggagcggagtccatcttcctgcagctgacccagtgcaaggagctctccctgaag
gtgcaggaggtcctgggtctctacatcccgtccagctccgaggaggacagcccggactcc
tcccaggccagcgagacgcgacgcctcctcgcctcctcgccggccggagcctcttcttct
tcttcttcttcttctcccgcggcgcgcgttcccacctatccttaa
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